Protein

View in Explore
Genbank accession
QPZ53413.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MATIDVGKLTFTHKGDYSSSTAYVLNDVVYYNGSAYIAKQATTNNVPTNATYWNLFVLKGTDTSVLTTQGDVLYHTGSALARLPAGTSGQFLKTQGSGANPVWGNVTSAILQMKSVSTGVQFSTNTAGWTGTSAPEYTPVTLTITPTSATSLLKVDYCFTCVHQSDYMGIYWLTYNHSGISETAVENDDSYGATRTFDYGNNNTSDMGSGISGTVYLDPQTTNAVTVKHRFGTSNASWETMINRTIAGNGNNDSAAGVCTVTISEIASGIITHTKGANINGD
Physico‐chemical
properties
protein length:282 AA
molecular weight: 29860,51640 Da
isoelectric point:5,39023
aromaticity:0,09574
hydropathy:-0,20000

Domains

View on InterPro
Domain architecture
QPZ53413.1
1 282 aa
ATT 14–56 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QPZ53413.1
1 282 aa
Domain Start End Length (AA) Confidence
N-terminal 1 24 24 0,5187
Central domain 25 223 200 0,0040
C-terminal 224 282 58 0,9986
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pelagibacter phage HTVC028P [NCBI] · taxon 2796519
No lineage information
Host
Candidadtus Pelagibacter sp. HTCC1062 [NCBI] · taxon 198252
Pseudomonadota Alphaproteobacteria Candidatus Pelagibacterales Candidatus Pelagibacteraceae Candidatus Pelagibacter

Coding sequence (CDS)

Genbank protein accession
QPZ53413.1 [NCBI]
Genbank nucleotide accession
MW273921.1 [NCBI]
CDS location
range 14784 -> 15632
strand -
CDS
ATGGCTACAATCGATGTGGGGAAATTAACCTTTACACATAAAGGAGATTATTCCTCTTCAACTGCGTATGTATTGAATGATGTTGTTTATTACAATGGATCAGCTTACATCGCAAAACAAGCAACAACTAATAATGTTCCAACAAACGCAACTTATTGGAATTTGTTTGTCTTAAAAGGAACTGACACATCAGTTCTAACAACTCAAGGAGATGTCCTTTACCATACTGGATCTGCTCTTGCTAGATTACCAGCTGGAACTTCTGGACAATTTTTGAAAACTCAAGGCTCTGGTGCTAATCCAGTTTGGGGAAATGTCACAAGTGCAATACTACAAATGAAAAGTGTATCTACTGGAGTTCAATTTAGTACAAATACAGCTGGTTGGACAGGAACAAGTGCTCCAGAATATACACCAGTCACTTTAACAATCACACCAACATCAGCGACAAGTTTATTAAAAGTAGATTATTGTTTTACTTGTGTCCATCAATCAGATTACATGGGTATATATTGGCTTACTTATAATCACTCTGGTATTTCAGAAACAGCAGTAGAAAATGATGACAGTTATGGTGCTACTAGAACTTTTGATTATGGAAATAACAATACTTCAGATATGGGTTCTGGTATTTCTGGAACAGTTTATTTAGATCCACAAACTACAAATGCTGTCACAGTAAAGCATAGATTTGGTACAAGTAATGCAAGTTGGGAAACTATGATTAATAGAACCATTGCTGGAAATGGTAATAACGATAGTGCAGCTGGAGTTTGTACTGTGACTATTAGTGAAATAGCTAGTGGAATAATAACGCACACTAAAGGTGCAAACATTAATGGAGATTAA

Genome Context

Tertiary structure

QPZ53413.1
ESMFold structure
Source ESMFold
pLDDT 79.0
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank