Protein

View in Explore
Genbank accession
YP_010669576.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,54
Protein sequence
MAVTKTEYLVNGGNTGWSKSDVISALETAFAGLGWHSGTAKTGVPTTCLAPGSDRPVYESVSSNWQYATRILPITFHRYNRYYDITNNGSTSWSVKRREDINYIYGPNYAGNEGWIRMYDIADIATGTAAVYRAGANTIPNRNGTTDPMFVDGQTYYIINIGDDDWVRLADSEADALAGTYIEPVNGSWSGDYGRFEIDLGTNPVLTVRQGDTINFSNNSTGHPLYIQDQSGAYNSSRVLNNTNYRTQSYRDFPSNQGIEIGTLTWQIDEWMQGDYYYVCQLHPSMNGIIRVLPSVSGYNGYYDLLSYWDYTVPAGGVPGKTDLQLRIRRGNNYYTGTGYLVSIEILNEAEGWSDDEAFTIPGSAIGGVSPDDDIVFGTNSLTTQQQNDRNGVCSLKVANVGAGSNFYQKYSDGAILKLEHDAGKTYGHTYYGFRMSSSNSYQIYIGSGVAWNYLNYYPGSSTWDRQGRWGGQRGLDVPADNIDMDNDSTWYEAHSICTSSTPTSYPLKIVTHKATSPQDTNFATITFVQTINSIDYAYLCFSPLKGTAVGSGVWDLDYVWNGTYLTVQPDSYGSDENIRLATFFPWRYDAADESVVGSTQAVKREAFWGYRRDASANNNYIYYWADYYSNNIHAYQSNNVSQYLGYYRNSTYDFTTVNEQNSTLDNVNDAVQSISVDSTANYYRPFKGLPLNGHMLPCPYYLPDDFTIIQYAVTPGATAFVTGDTITVSAGEVYEIIHVYYATNQTALDGVAGNTSKGIAFCARTT
Physico‐chemical
properties
protein length:767 AA
molecular weight: 85238,27670 Da
isoelectric point:4,65389
aromaticity:0,14081
hydropathy:-0,45033

Domains

View on InterPro
Domain architecture
YP_010669576.1
1 767 aa
STR 197–304 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_010669576.1
1 767 aa
Domain Start End Length (AA) Confidence
N-terminal 1 30 30 0,7257
Central domain 31 463 434 0,8773
C-terminal 464 767 303 0,4591
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Synechococcus phage S-H9-1 [NCBI] · taxon 2783674
Uroviricota Caudoviricetes Pantevenvirales Scyllavirus Scyllavirus aitchnine
Host
Synechococcus sp. MW02 [NCBI] · taxon 1620844
Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus

Coding sequence (CDS)

Genbank protein accession
YP_010669576.1 [NCBI]
Genbank nucleotide accession
NC_070961 [NCBI]
CDS location
range 80881 -> 83184
strand -
CDS
ATGGCAGTAACAAAGACAGAATATCTAGTCAATGGTGGCAACACTGGATGGTCGAAGAGTGATGTTATCTCTGCCTTAGAGACTGCATTTGCTGGACTTGGGTGGCATAGTGGCACAGCAAAGACTGGTGTTCCAACAACATGCTTAGCACCAGGAAGTGACCGACCAGTTTACGAAAGTGTTAGTAGCAATTGGCAATATGCTACTAGAATTTTACCAATTACTTTTCATAGGTATAATAGGTATTATGACATTACCAATAATGGATCTACTAGTTGGTCTGTAAAACGAAGAGAAGATATTAATTATATCTACGGTCCAAACTATGCAGGCAATGAAGGTTGGATTAGAATGTACGATATCGCTGACATTGCTACAGGAACTGCTGCAGTTTATCGTGCTGGAGCTAACACTATTCCAAACAGAAATGGAACTACAGATCCTATGTTTGTAGATGGACAGACATACTATATTATTAATATTGGCGATGATGATTGGGTCAGACTAGCAGACAGTGAAGCAGATGCTCTTGCTGGAACATACATTGAACCTGTCAATGGCTCATGGTCTGGTGATTATGGTAGATTTGAAATTGATTTGGGAACTAATCCAGTTCTTACAGTAAGACAGGGTGATACTATCAATTTTTCAAATAATTCAACTGGACATCCTCTATACATTCAGGATCAGTCTGGAGCATATAACTCATCTAGAGTATTGAATAATACAAATTATCGTACTCAATCTTATAGAGATTTCCCGAGTAACCAAGGTATTGAGATTGGAACACTAACATGGCAGATTGATGAATGGATGCAAGGTGATTATTATTATGTGTGTCAACTTCATCCATCAATGAATGGAATTATAAGAGTATTGCCATCAGTATCTGGATACAATGGTTATTATGATTTGTTATCATACTGGGATTATACTGTACCTGCTGGCGGAGTCCCAGGTAAAACAGATCTTCAGTTAAGAATTAGGAGAGGAAATAACTACTATACTGGTACTGGATATTTGGTATCGATTGAAATTCTAAACGAAGCAGAAGGATGGTCTGATGATGAAGCATTTACTATTCCTGGTAGTGCAATTGGTGGTGTCAGTCCAGACGATGATATTGTATTTGGAACTAATAGTCTGACTACACAACAACAGAATGATCGTAATGGTGTATGTTCTCTGAAAGTTGCTAATGTAGGAGCAGGTAGTAATTTTTATCAGAAGTATAGTGATGGTGCAATTCTAAAACTAGAACATGATGCTGGAAAAACTTATGGGCATACTTACTATGGATTTAGAATGTCTAGTTCCAATAGTTATCAAATTTATATTGGATCTGGGGTAGCATGGAACTATCTAAATTATTATCCTGGTAGTTCTACTTGGGATAGACAAGGAAGATGGGGTGGACAGAGAGGATTGGATGTTCCAGCAGATAATATTGATATGGACAATGATTCTACTTGGTATGAAGCACACAGTATTTGTACCAGTTCAACACCAACCAGTTATCCACTGAAGATTGTTACTCATAAAGCAACATCTCCACAAGATACTAATTTTGCTACTATTACATTCGTACAAACAATCAATAGTATTGACTATGCATACCTTTGTTTCTCTCCACTGAAAGGAACTGCAGTTGGATCGGGAGTATGGGATTTGGATTATGTCTGGAACGGAACGTATTTGACTGTTCAACCTGATTCATATGGCAGTGATGAAAATATTAGACTAGCAACATTTTTCCCTTGGAGATATGATGCTGCAGATGAAAGTGTTGTTGGCAGCACACAGGCAGTAAAACGTGAAGCATTCTGGGGATACCGACGTGATGCTAGTGCTAATAATAATTACATCTATTATTGGGCTGATTATTACTCAAATAATATTCATGCATATCAATCTAATAATGTCTCTCAATACCTTGGATACTATAGAAACAGCACTTATGATTTCACTACAGTGAATGAACAAAATAGCACACTCGATAATGTAAATGATGCTGTCCAAAGTATTTCTGTAGACTCTACAGCAAATTACTATAGACCATTCAAAGGGTTACCATTGAATGGACATATGCTTCCATGTCCTTATTATTTGCCAGATGATTTCACAATCATTCAGTATGCAGTCACTCCTGGTGCTACTGCTTTTGTGACTGGAGATACTATTACTGTTAGTGCTGGTGAAGTATATGAAATTATCCACGTTTATTATGCAACAAATCAGACTGCATTGGATGGCGTTGCTGGTAATACATCCAAGGGTATTGCATTCTGTGCGAGGACAACTTAA

Genome Context

Tertiary structure

YP_010669576.1
ESMFold structure
Source ESMFold
pLDDT 36.0
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H9-1 from the Yellow Sea, China Jiang,T. 2019-04-04 — GenBank