Phage RBP Database

Genbank accession

AFU64267.1 [GenBank]

Protein name

tail fiber protein

RBP type

TSP

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,98

Protein sequence

MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEVVYAKSGQSLSGYKVIYDKVSQRAYALPSNIGTVTVTSLVDGILTHSGGTVDLGALAVLREEYVTLVENFTSGFTIRVKNEVVSDGVNLYRWAGSLPKTVNAGETVDSAGGVNNDTWVVLGKPDINICSDISVLRTTEPSYIGQHITVLGYYSDSPGLGGGTFMAFASSEADDGVNIFVTAGGKRWKRTGSYIDIPVENGGMMTSRTAEQNSDALERLHACLPQTGGKLRFSGFYDIKYGAIRPPRVMWEGVGRDSCGLRKTGNDIKTVPDRIWQGAPHSFSLDFIAAIDMDSSVAGDLTGNFSRSGGITGMSLIGAATAKNAYGIYSSISYMVRLEDLYIEHVMTGYRTSDSWLQAFDSLLIKDVQDGISVDTGGTTFNLNNVYVRNVSRWAYKFTNITYSTLKGCAADYVTGSAYVFLGCTSVVMDGCGAEEVHGSFFECNQSRIAINGFRGVNLVDTGVVACIFTQCGVTITASYLPEFSGSHTSKYWQVGDTTINLDNTVAPDASRVLWGAATSWLNFSHYNGNYTIWGTVTWTATGYLINGIAHVYGGNPPDASVTQFGTGARWELAIPVAGQPYKWIHMGSGVWKVAGSVAA

Physico‐chemical properties

protein length:	630 AA
molecular weight:	67616,13680 Da
isoelectric point:	5,90923
aromaticity:	0,10635
hydropathy:	-0,04302

Domain architecture

AFU64267.1

1 630 aa

ATT 1–151 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:3.30.2020.50
ATT

G3DSA:3.30.2020.50 G3DSA:2.10.10.80

IPR040775
RBD

IPR040775

AFU64267.1

1630 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0071
STR

DC_0071

AFU64267.1

1630 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:3.30.2020.50	ATT	G3DSA:3.30.2020.50	1	94	Merged direct domain	G3DSA:3.30.2020.50	N-terminal	Low	Positional only	289 proteins / 289 hits
IPR040775	RBD	DC_0821	91	153	InterPro cluster	Tail spike TSP1/Gp66, N-terminal domain	Central	High	Text match	1281 proteins / 1285 hits
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	95	151	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

AFU64267.1

1 630 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	238	238	0,9924
Central domain	239	552	315	0,9824
C-terminal	553	630	77	0,8876

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Salmonella phage STML-13-1 [NCBI] · taxon 1204530

Uroviricota Caudoviricetes Pantevenvirales Cvivirinae Kuttervirus

Host No host information

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)