Protein

View in Explore
Genbank accession
AFU64267.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEVVYAKSGQSLSGYKVIYDKVSQRAYALPSNIGTVTVTSLVDGILTHSGGTVDLGALAVLREEYVTLVENFTSGFTIRVKNEVVSDGVNLYRWAGSLPKTVNAGETVDSAGGVNNDTWVVLGKPDINICSDISVLRTTEPSYIGQHITVLGYYSDSPGLGGGTFMAFASSEADDGVNIFVTAGGKRWKRTGSYIDIPVENGGMMTSRTAEQNSDALERLHACLPQTGGKLRFSGFYDIKYGAIRPPRVMWEGVGRDSCGLRKTGNDIKTVPDRIWQGAPHSFSLDFIAAIDMDSSVAGDLTGNFSRSGGITGMSLIGAATAKNAYGIYSSISYMVRLEDLYIEHVMTGYRTSDSWLQAFDSLLIKDVQDGISVDTGGTTFNLNNVYVRNVSRWAYKFTNITYSTLKGCAADYVTGSAYVFLGCTSVVMDGCGAEEVHGSFFECNQSRIAINGFRGVNLVDTGVVACIFTQCGVTITASYLPEFSGSHTSKYWQVGDTTINLDNTVAPDASRVLWGAATSWLNFSHYNGNYTIWGTVTWTATGYLINGIAHVYGGNPPDASVTQFGTGARWELAIPVAGQPYKWIHMGSGVWKVAGSVAA
Physico‐chemical
properties
protein length:630 AA
molecular weight: 67616,13680 Da
isoelectric point:5,90923
aromaticity:0,10635
hydropathy:-0,04302

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
1–94
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
IPR040775
91–153
IPR040775
AFU64267.1
1 630
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage STML-13-1
[NCBI] 		1204530 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFU64267.1 [NCBI]
Genbank nucleotide accession
JX181828 [NCBI]
CDS location
range 94530 -> 96422
strand -
CDS
ATGAACGAAATGTTTAGTCAAGGTGGTAAAGGTTCGACTGGAATCTTAACCAATAAACAAGCAGTAGCCAGACACTTTGGTGTTAAACAATCTGAGGTTGTTTATGCCAAATCAGGACAGTCCTTGTCTGGTTATAAAGTGATCTACGATAAGGTATCTCAACGTGCCTACGCTCTCCCTTCTAACATTGGTACTGTAACGGTCACTAGTTTAGTCGACGGCATTCTCACGCACTCTGGAGGCACCGTAGATTTGGGTGCATTGGCTGTGTTAAGGGAAGAGTATGTTACTCTTGTTGAAAATTTTACTTCTGGATTTACGATTCGTGTCAAAAACGAAGTTGTGAGTGATGGGGTAAATTTGTATCGGTGGGCTGGTTCTTTACCAAAAACTGTTAATGCAGGTGAAACCGTCGATAGTGCTGGTGGTGTAAATAATGATACTTGGGTAGTTTTGGGTAAACCAGATATCAATATTTGCTCAGATATTTCTGTTCTACGAACAACTGAACCTTCATATATTGGTCAACATATAACAGTCCTTGGGTATTATTCCGATTCTCCGGGTCTTGGTGGAGGAACATTTATGGCATTTGCCAGTTCCGAAGCTGACGATGGAGTTAATATCTTTGTAACGGCAGGAGGAAAACGCTGGAAGCGAACGGGAAGCTACATAGATATTCCGGTTGAGAATGGTGGCATGATGACCTCCAGAACGGCCGAACAAAACAGCGATGCTCTTGAACGGCTTCATGCTTGTCTTCCTCAAACTGGGGGTAAGTTACGCTTCTCAGGTTTCTACGATATTAAGTACGGAGCAATTCGCCCGCCACGAGTTATGTGGGAGGGGGTGGGTAGAGATTCTTGCGGCCTTCGCAAAACAGGTAACGACATTAAAACCGTTCCAGATCGCATATGGCAAGGCGCACCGCATAGTTTCTCCCTTGACTTTATTGCTGCCATTGATATGGATAGTAGCGTTGCAGGGGATCTGACTGGTAACTTTAGTCGTTCCGGAGGAATAACTGGGATGAGCCTGATTGGCGCTGCTACTGCAAAAAATGCCTATGGTATTTATAGCTCTATCAGTTATATGGTTCGATTGGAGGATTTGTATATTGAGCATGTTATGACTGGCTACAGAACTAGTGACAGTTGGCTTCAGGCGTTTGATTCACTTCTCATCAAAGATGTTCAAGATGGCATCTCTGTAGATACTGGTGGTACAACTTTTAACTTAAATAATGTTTATGTCAGGAATGTATCCCGTTGGGCATATAAGTTTACTAACATTACTTATTCCACTCTTAAAGGTTGTGCAGCGGATTATGTAACTGGTTCCGCTTATGTATTCTTAGGTTGCACTAGTGTAGTGATGGACGGATGTGGAGCAGAAGAGGTTCACGGTAGCTTCTTTGAGTGTAATCAATCTCGTATAGCTATTAATGGATTCCGTGGTGTTAACCTTGTGGATACTGGTGTGGTTGCATGCATCTTTACACAGTGTGGCGTTACAATCACGGCAAGTTACTTACCAGAGTTCTCTGGCTCGCATACTAGCAAATACTGGCAGGTTGGTGACACTACTATTAATCTCGATAACACAGTGGCTCCTGACGCATCTAGAGTTCTTTGGGGGGCAGCAACATCATGGTTAAACTTCTCACACTATAATGGTAATTATACCATCTGGGGGACAGTTACCTGGACTGCAACCGGCTACCTCATTAATGGTATTGCACATGTCTATGGGGGAAACCCTCCTGATGCTTCTGTTACTCAGTTCGGTACGGGTGCAAGATGGGAGCTAGCTATTCCTGTTGCTGGGCAACCATATAAATGGATTCACATGGGTTCTGGTGTGTGGAAAGTTGCTGGATCTGTAGCAGCATAA

Tertiary structure

PDB ID
f2ef4bbd648408c2f0c881ec0a33311529aabc400eb09f69a0d52069165e1028
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8090
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages quickly and effectively reduce contamination of various foods with Salmonella Woolston,J., Parks,A.R., Hanna,L.F., Charbonneau,D. and Sulakvelidze,A. 2016-07-02 — GenBank