Protein

View in Explore
Genbank accession
QDH45028.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,99
Protein sequence
MSSGCGDTLSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRSAGFSPASFNFTTGGTLGVNDANKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFGGKTLTIDCKAKFIGDGALIFTNMGSGSIIEKPFMESATTPWVIKPWTDDNQWITDPAAVVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKDQNISSVLEIRECTGVEVHRASGLMACFLFRGCHFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVLYPVWDGFDLGADTDMNPEADRPGDYPVSQYPVHMLPLNHLIDNLLVRGCLGVGFGMDGQGLYVSNITVEDCAGSGAYLLTHETVFTNIAVIDTNTKDFPANQIYISGACRVNGLRLIGIRSTAGQGLTIDAPNSTVSGITGFVDPSRINVANLMEEGLGNTRINSFNNDSAALRLRIHKLTKTLDSGSVYSHINGGPGSGSAWTEITAISGSLPDAVSLKINRGDYRAMEIPVAVTVLPDAAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 72930,82530 Da
isoelectric point:5,06733
aromaticity:0,08626
hydropathy:-0,16272

Domains

View on InterPro
Domain architecture
QDH45028.1
1 684 aa
ATT 65–135 · STR 136–684
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QDH45028.1
1 684 aa
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9928
Central domain 155 623 470 0,9742
C-terminal 624 684 60 0,9033
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage SI2 [NCBI] · taxon 2575320
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host No host information

Coding sequence (CDS)

Genbank protein accession
QDH45028.1 [NCBI]
Genbank nucleotide accession
MK761199.1 [NCBI]
CDS location
range 31600 -> 33654
strand +
CDS
ATGTCTAGTGGTTGCGGCGATACATTGTCACTTAACGATTTACAAATAGCTAAGAAACACCAGATTTTCGAAGCTGAGGTTATCACCGGCAAACAGGGTGGTGTAGCAGGCGGCGCAGATATCGACTACGCCACTAACCAGGTAACAGGTCAGACGCAGAAGACGCTTCCCGCAGTCTTACGTAGTGCTGGTTTCTCCCCGGCATCTTTTAATTTTACGACCGGGGGTACTCTCGGCGTAAACGACGCCAATAAAGCGGTTCTTTGGCCGAAAGAAGATGGCGGGGATGGTAACTATTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACAGGCGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGAGATATCACCTTCCGTGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAATTGGCGGATGCCGCTGTTGATAGTGTTCTTATCGACCGCGATTACACTTTCAGCAATAACGAAACCGTTAATTTTGGCGGTAAGACCTTAACCATCGACTGTAAAGCGAAATTTATCGGCGATGGGGCTTTGATTTTCACTAATATGGGTAGTGGTTCTATAATAGAAAAGCCTTTCATGGAGAGCGCTACGACCCCGTGGGTAATTAAGCCGTGGACTGACGATAATCAGTGGATAACAGACCCTGCCGCGGTAGTAGCAACGCTGAAACAATCAAAAACTGATGGCTATCAGCCAACAGTAAATGATTATGCTAAGTTCCCCGGCATAGAATCTCTCCTTCCACCTGAAGCTAAGGACCAAAATATTTCATCTGTCCTTGAAATACGGGAATGCACCGGCGTTGAGGTTCACCGGGCTAGCGGTCTTATGGCGTGCTTCCTGTTTCGCGGCTGCCATTTCTGCAAGATGGTGGACGCCGATAACCCTAGTGGCGGTAAGGATGGGGTAATTACCTTCGAAAACTTGAGCGGGGATTGGGGTAAAGGAAACTATGTCATTGGCGGGCGTACAAGTTACGGTTCGGTAAGTAGCGCCCAGTTTTTACGTAATAATGGTGGCTTTGAACGTGATGGTGGGGTTATTGGGTTTACCTCATACCGTGCCGGCGAGAGCGGAGTTAAGACATGGCAGGGGACTGTAGGTTCCACAACGTCACGAAATTATAATCTTCAATTCCGCGATTCCGTAGTTTTGTACCCGGTATGGGACGGATTCGATTTAGGCGCAGATACCGACATGAACCCGGAAGCAGATAGGCCGGGGGATTACCCTGTATCTCAGTACCCAGTACATATGCTCCCGTTAAACCATTTGATTGATAACTTGTTGGTTAGAGGGTGTTTAGGAGTTGGCTTCGGCATGGATGGGCAAGGGCTATACGTTTCTAACATAACCGTAGAAGATTGCGCTGGCAGTGGAGCATATCTGTTGACGCATGAAACAGTATTCACAAACATTGCGGTAATAGACACGAATACTAAAGACTTTCCTGCTAATCAGATTTACATTTCAGGGGCTTGCCGTGTTAATGGGCTGCGCTTGATAGGCATCCGGTCTACCGCAGGCCAAGGGTTAACAATAGACGCGCCAAACAGTACAGTTAGCGGAATAACTGGATTCGTCGACCCATCAAGAATTAACGTGGCCAATCTAATGGAAGAAGGTCTGGGAAACACACGTATAAATAGTTTCAATAATGATAGCGCGGCCCTGCGACTCAGAATACATAAGCTAACGAAAACTTTGGATAGTGGGTCAGTGTACTCCCACATTAACGGTGGTCCCGGTTCTGGTTCAGCATGGACTGAAATTACAGCTATTTCTGGGTCGTTGCCGGATGCGGTGTCCCTAAAAATTAACCGTGGCGATTATCGTGCAATGGAAATACCCGTAGCCGTTACCGTGCTACCCGACGCAGCCGTTAGGGATAATGGCTCCATCTCGCTATACCTAGAAGGTGATAGTCTTAAAGCATTAGTTAAGCGTGCGGACGGGAGCTATACACGATTGACTTTGGCGTAA

Genome Context

Tertiary structure

QDH45028.1
ESMFold structure
Source ESMFold
pLDDT 69.0
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Salmonella bacteriophage diversity and host specificity revealed by physiological characterization and whole genome sequencing Fong,K., Wang,S., Delaquis,P., Tremblay,D., Moineau,S., Levesque,R. and Goodridge,L. 2019-09-14 — GenBank