Phage RBP Database

Genbank accession

ADX32213.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,91

TF

Evidence RBPdetect2

Probability 0,97

Protein sequence

MPLPKPDDLSVIWASIGQATKPAPNKIMTGWTNEIPPYQWHNWYFQRVDKALAHINQQGIAMWDAATTYEGGTSLAKGSDGVVYKAKRSSRGVDPVSPASNLDWEPAFERYGEAAKVNSQLQSLKKDYETLANISNIAMARQNLSVYSKAETDVRYAFKAGAAGQVFAVAPATAGSHAVPRDQLPALYPRAGAAPGIIALASQAEGYAGTVENKAIAPSVLKALTLYKSQNLADLPDKQLARSNLGLASSAVLPENTWLKRNDNLADVPNKAAARANLGITSSALLPESTWLKTASNLADIPNKPTARANLGITDTATLPVGDVMRKSENLAGLTNVPQARANLGLGTMATANSGDFLTSANNLGDVRDAQAARNNLGLKGCATLDALGLPNGATGLDFQSEQSSSASGWAALPNGLILQWGQGPALYDDRSTIVRLPRPARILNVSVTVMGTFNASIGPGAYMTDQWSNTQFRVSCNWGNWAYPFCWFAITTIYGM

Physico‐chemical properties

protein length:	497 AA
molecular weight:	52911,07520 Da
isoelectric point:	8,89330
aromaticity:	0,07847
hydropathy:	-0,21127

Domain architecture

ADX32213.1

1 497 aa

RBD 402–491 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil G3DSA:2.60.40.3940

IPR054075
RBD

IPR054075

ADX32213.1

1497 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2128
STR

DC_2128 DC_1977

DC_0362
RBD

DC_0362

ADX32213.1

1497 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	114	134	Coils	Coil	-	-	-	-
G3DSA:2.60.40.3940	RBD	G3DSA:2.60.40.3940	402	491	Merged direct domain	G3DSA:2.60.40.3940	C-terminal	Low	Positional only	77 proteins / 77 hits
IPR054075	RBD	DC_0717	413	491	InterPro cluster	Putative tail fiber protein gp53-like, C-terminal	C-terminal	Low	Positional only	174 proteins / 174 hits

Proteins with similar domain architecture

Phage

Pseudomonas phage PAK_P3 [NCBI] · taxon 981431

Uroviricota Caudoviricetes Vandenendeviridae Nankokuvirus PAKP3

Host

Pseudomonas aeruginosa PAK [NCBI] · taxon 1009714

Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)