Protein

View in Explore
Genbank accession
AVH85344.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,86
TF
Evidence Phold
Probability 1,00
Protein sequence
MSNTLLLKRSAVPGKTPLLTDLQLGQLAINTYDGKLYTRKDNGTASIIDLGNITLSGDVTGSGSGSITLTLANSGVTAGTYKSVTVDAKGRVTAGTNPTTLAGYGITDGVNVSSLAAANGVATLDSFGKLLTSQIPASLVGAVVYQGVWNASTNSPTLTSGTGTKGNYYKVSVAGSTNIDGHSSWNIGDMIIFNGTTWDKIDGVESEVLSVFGRTGVVTMLSSDVTTALGYTPLSGNQNITLSGDATGSGATSITVTLADSGVTAGTYSSVTVDAKGRVTSGGQINSGTVTSALGYTPVQTVAGRTGNVVLTTSDVTGYGTVSDSVFSITNNSDPTKIAKFDASGISTGTTNTYTLPSVTGTLASLANISQTFTGTTTFSGTSVTVGSSTATATYGFGSGATVNGSTKTINIGTSGVSGSTTAITVGSTTSTTTIALNGAVTASTPTTADNSTLIATTAFVKNQGYAQSSALSASSGSSLVNFIASGSAAVSRTVQSVLRDTFNVRNYGAVGNGVTDDTAALNAMFAMIQSNATVVDVYFPAGNYIYSGSGLTGNAYVGRIRGDGPTASMITAASSAVTGSALTFTATADGLTLQDIGIFGPGQGAAGGQDGVVISNGGSPVRQPRFVNCEIYNWPGKALNVTTPIAGSAHNCRFQNNIHGVYLSGGTSFTFYNCYPNGNKKSGYWLNGTTYSTFNGCAADTNGIAYLLSGSTAITLVGCGNEAGTANNLTITNSSLTSNVATFTYSGPDQSADFIGNGRTVIIQGSTNIPAANAGISGLGDGRWPIASVGTNTISINLTSANISSAADTGTASFWAGDGVVINGSTIIQIQGYRTIAPAQTSSSMLVTEGSANQVTVTGMRSTQGSGSLQLVDMWLGNGTANIIRMNNAFTGGTYSAANNISTVSNGTWTLPTVTGVNALNSNGNLSLTTTASATSGTNNNSPTAFLIGTYWTGTASSQDVVAIQSKPATGANPLISLNFQHQSGSSGGMQLSVNGTPFLSGNSQFIGTSINTSGNATIGGTLSVTGVATAPTAAPGTNTTQIATTAFVQTATSSYLPLAGGTVTGAITLNAAPVVNGTAGWTTVSWNKGMRLSPSTAIEFAGPSSNHFGIGNSGGTLYFFTNTADDNSAAPNYFMTANSSGTVTYNAPVNGTFFNVSVSGAVAAAGTTQGTATALTSSVNVVTSGTGGVVLPAATGGMELVVINTTGSAINVYPASGGQIDSLGANVAFSLGAGAKLCYVATSTTQWYSLTAVYA
Physico‐chemical
properties
protein length:1257 AA
molecular weight: 125569,91670 Da
isoelectric point:5,45151
aromaticity:0,07001
hydropathy:0,10867

Domains

Domains [InterPro]
IPR024535
503–720
IPR024535
AVH85344.1
1 1257
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RsoM2USA
[NCBI] 		2070027 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVH85344.1 [NCBI]
Genbank nucleotide accession
MG752970 [NCBI]
CDS location
range 285114 -> 288887
strand +
CDS
ATGTCAAATACACTTCTCCTTAAGCGCTCAGCGGTTCCAGGAAAGACGCCGCTATTAACGGATTTGCAGCTAGGTCAGCTTGCTATTAACACATATGATGGCAAGCTGTATACTAGAAAAGATAATGGAACGGCATCAATTATAGATCTTGGAAACATAACTTTGTCCGGTGATGTCACTGGATCTGGATCTGGTTCAATAACATTAACGTTAGCAAACTCTGGTGTTACGGCTGGAACTTATAAATCGGTAACCGTCGATGCTAAAGGACGAGTGACGGCTGGAACTAATCCCACCACTCTTGCTGGTTATGGAATAACTGATGGCGTAAACGTTTCATCGTTGGCTGCAGCAAATGGTGTTGCTACTTTAGATTCTTTTGGAAAGCTGTTGACATCACAAATTCCTGCTTCTCTTGTTGGAGCGGTTGTTTATCAAGGGGTGTGGAATGCATCTACTAACTCTCCAACATTGACATCTGGTACTGGAACAAAGGGTAATTATTATAAAGTATCAGTAGCAGGTTCAACAAACATAGATGGCCATTCAAGTTGGAATATTGGAGATATGATTATCTTCAATGGAACGACATGGGATAAAATTGATGGAGTAGAATCTGAGGTTCTATCAGTTTTTGGTAGAACCGGTGTGGTAACGATGCTATCATCTGACGTTACCACCGCACTTGGTTATACACCACTTAGTGGAAACCAAAATATCACATTGTCAGGTGATGCTACTGGATCTGGGGCAACTTCTATCACTGTAACTCTAGCTGATTCAGGAGTAACGGCCGGAACATACTCATCAGTTACTGTTGATGCTAAAGGTAGAGTGACATCGGGTGGACAAATAAATTCAGGCACTGTTACGTCGGCTCTTGGATACACGCCTGTTCAGACAGTTGCGGGAAGAACAGGAAACGTAGTACTAACGACTAGCGATGTTACCGGTTACGGTACTGTGAGTGACTCGGTATTTTCGATTACCAACAATTCCGATCCTACAAAAATTGCGAAATTTGATGCAAGCGGTATTTCAACAGGAACAACGAACACTTATACGCTTCCATCGGTTACTGGTACTCTAGCAAGTCTCGCGAATATTTCGCAAACATTTACAGGCACCACAACATTTTCGGGTACATCCGTTACTGTGGGAAGTTCGACTGCAACCGCGACGTATGGCTTTGGATCTGGTGCTACGGTAAACGGATCTACAAAGACTATTAACATTGGTACGTCTGGTGTTTCAGGTTCTACTACTGCTATAACTGTCGGTTCAACTACGTCCACGACGACAATTGCCCTTAATGGTGCGGTAACTGCATCAACACCAACTACCGCGGATAACAGTACGCTTATAGCTACCACCGCTTTTGTTAAAAATCAGGGATATGCGCAATCATCCGCATTAAGTGCTTCGTCTGGTTCTTCACTCGTTAATTTTATCGCATCTGGATCTGCTGCAGTATCAAGAACTGTTCAATCCGTTTTGCGTGATACATTCAACGTTCGCAATTATGGTGCTGTTGGTAATGGGGTTACAGATGACACTGCTGCCCTTAATGCCATGTTTGCGATGATTCAGTCTAATGCAACTGTCGTAGACGTTTATTTCCCGGCCGGAAACTACATTTATTCAGGAAGTGGATTAACCGGTAATGCATATGTTGGAAGAATCCGTGGTGATGGTCCAACAGCATCTATGATTACTGCAGCATCAAGCGCGGTTACGGGTTCTGCACTTACATTCACTGCAACTGCCGATGGACTAACACTGCAGGATATAGGTATTTTTGGTCCGGGTCAAGGTGCTGCTGGTGGTCAAGACGGCGTGGTTATATCGAACGGTGGATCACCTGTTCGTCAGCCAAGATTTGTAAATTGCGAAATTTACAATTGGCCAGGAAAAGCATTGAATGTTACAACACCAATAGCCGGTTCTGCACATAATTGCCGCTTCCAGAATAACATTCATGGCGTATATTTGAGTGGTGGAACAAGCTTTACATTCTATAACTGCTATCCTAATGGTAATAAGAAGTCGGGATACTGGTTGAATGGTACCACATATAGCACCTTCAACGGCTGCGCGGCAGATACCAATGGTATTGCATACTTACTGTCTGGATCAACTGCTATCACCCTTGTAGGATGTGGTAATGAAGCGGGTACTGCTAATAATTTGACCATTACGAACAGTTCGCTTACGTCCAACGTTGCAACATTCACATACTCCGGTCCTGATCAATCGGCTGATTTTATAGGTAATGGTAGAACCGTGATTATTCAGGGTTCAACAAACATCCCAGCTGCCAACGCGGGTATATCTGGTCTTGGTGATGGTCGCTGGCCTATAGCATCTGTTGGTACAAATACAATTAGTATTAACTTGACAAGTGCAAACATTTCTTCAGCTGCTGATACGGGTACGGCTAGCTTCTGGGCTGGAGATGGTGTCGTTATAAACGGATCTACGATTATTCAAATTCAGGGTTACAGAACAATAGCTCCAGCACAGACAAGCAGCTCTATGCTGGTGACTGAAGGTTCTGCTAACCAGGTTACCGTGACTGGTATGCGTAGCACACAGGGAAGTGGATCTCTGCAGCTTGTTGATATGTGGTTGGGTAACGGCACTGCGAACATTATACGGATGAATAACGCATTCACCGGCGGTACTTATTCGGCTGCAAACAATATTTCGACGGTGTCAAACGGAACATGGACGCTTCCTACTGTTACAGGCGTAAATGCTTTAAACTCTAACGGAAACCTTTCTCTTACGACGACTGCTTCGGCCACATCAGGTACCAATAATAACAGTCCAACTGCTTTTCTGATTGGCACATACTGGACAGGCACCGCATCATCGCAAGATGTGGTTGCTATTCAGTCAAAGCCTGCTACCGGTGCAAATCCTTTAATTTCATTGAACTTCCAGCATCAATCTGGATCTTCAGGTGGTATGCAATTGTCGGTTAATGGAACTCCATTCTTGTCTGGAAACAGTCAGTTTATTGGTACTAGCATTAACACGTCGGGTAATGCTACTATTGGTGGCACATTGAGTGTGACTGGTGTTGCAACGGCCCCTACAGCAGCACCAGGAACTAACACCACACAAATTGCTACAACGGCATTTGTGCAAACCGCGACATCTTCATATCTGCCGCTTGCTGGTGGAACGGTTACTGGTGCTATTACGTTGAACGCGGCTCCGGTTGTAAATGGAACAGCGGGATGGACGACTGTAAGCTGGAATAAGGGAATGAGACTATCTCCATCCACTGCTATTGAATTTGCGGGTCCTTCTAGCAACCACTTTGGTATAGGTAACTCTGGCGGTACGCTGTATTTCTTCACAAACACTGCCGATGATAACTCAGCAGCTCCTAACTATTTCATGACTGCCAATAGTTCAGGAACCGTGACGTACAATGCACCGGTTAATGGTACGTTCTTTAACGTATCTGTTTCGGGTGCGGTTGCAGCAGCAGGTACTACGCAAGGAACGGCTACAGCGCTAACTTCATCGGTTAATGTGGTTACATCAGGAACAGGTGGAGTAGTTCTTCCAGCTGCAACAGGAGGAATGGAGTTGGTGGTTATCAATACTACAGGTTCTGCTATTAACGTATATCCAGCTTCAGGCGGTCAAATTGACTCGTTGGGAGCTAATGTAGCATTCTCGTTGGGAGCGGGAGCTAAATTGTGCTATGTTGCTACATCTACTACCCAATGGTATTCATTGACTGCAGTGTATGCATGA

Tertiary structure

PDB ID
6f8b3af6f896a6deb8aa3e2aa6fc20885793b50373859e6b511c082ed009967e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5957
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of RsoM2USA, the largest bacteriophage infecting plant pathogenic bacterium Ralstonia solanacearum Ahmad,A.A., Addy,H.S. and Huang,Q. 2021-09-27 — GenBank