Phage RBP Database

Genbank accession

YP_009820998.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,72

TF

Evidence RBPdetect2

Probability 0,92

Protein sequence

MAYSWQEQIKPAGTQDIQCDIEYLDKSYIHVYLDGVETTGYTWTSSTNIRLNTALTADTTVLLIRKTEREYLYIEFASGSPFIEVNVDSQNTQFLHLAQELVEGRAIPGFYGDISMNGYRITNLGDGVNPGDAVNKGQLDVVDARVTALEQGINTDDVTIPWCTVTTVPTNIISPPYRFTRATLYLDGVHQDIGYGFSIVNNQIILAETIPAGTVVSVRIGQDSTDLDAVSRSEFDDLKEYVYNMDLGEL

Physico‐chemical properties

protein length:	250 AA
molecular weight:	27771,60660 Da
isoelectric point:	4,24067
aromaticity:	0,09600
hydropathy:	-0,16600

Domain architecture

YP_009820998.1

1 250 aa

ATT 13–103 · RBD 120–154 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604 IPR008635

YP_009820998.1

1250 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1609
STR

DC_1609

YP_009820998.1

1250 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	13	103	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits
IPR008635	RBD	DC_0221	120	154	InterPro cluster	Trimeric autotransporter adhesin YadA-like, stalk domain	C-terminal	Medium	Text match	14 proteins / 17 hits

Proteins with similar domain architecture

Phage

Escherichia phage Minorna [NCBI] · taxon 2547246

Uroviricota Caudoviricetes Autographivirales Slopekvirinae Drulisvirus

Host

Escherichia coli [NCBI] · taxon 562

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

YP_009820998.1 [NCBI]

Genbank nucleotide accession

NC_048172.1 [NCBI]

CDS location

range 6468 -> 7220
strand -

CDS

ATGGCATACAGCTGGCAAGAGCAAATCAAGCCAGCTGGTACCCAGGATATCCAGTGTGATATTGAATATTTGGACAAGTCCTATATTCATGTATATCTCGACGGCGTTGAAACCACTGGGTACACCTGGACCAGCTCTACAAATATTAGGCTGAACACAGCCTTGACAGCGGATACGACGGTACTGCTCATTCGCAAGACTGAGCGCGAGTATCTGTACATTGAGTTTGCTAGCGGTTCCCCATTCATCGAGGTGAACGTAGACTCTCAAAACACACAGTTCTTACACTTAGCTCAAGAGCTGGTGGAGGGTAGGGCCATCCCCGGATTCTACGGGGATATAAGCATGAACGGCTACCGGATTACCAATCTTGGGGATGGTGTTAATCCCGGAGACGCTGTAAACAAGGGACAGCTGGATGTAGTAGATGCCCGTGTAACCGCGCTTGAGCAGGGTATAAACACAGATGATGTGACTATCCCGTGGTGTACTGTTACCACGGTCCCGACTAATATCATCAGCCCACCGTACCGATTTACTCGTGCCACCTTGTATCTTGATGGGGTGCACCAGGATATCGGTTACGGGTTCAGTATTGTGAACAACCAGATTATCCTGGCTGAGACAATTCCGGCTGGTACAGTAGTGTCTGTGCGTATCGGACAGGATTCGACGGACTTGGATGCAGTGTCACGGTCTGAGTTCGACGACTTAAAAGAGTATGTATATAACATGGACTTAGGAGAACTTTGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)