Protein

View in Explore
Genbank accession
WAX24428.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MTGVFSWSQTASNNANADPSVNWAEGMAPSAVNDSARAMMASTAKWRDDISGAIVTSGTSTLYSVSSNQGFTSLAAMNGQIVAFTPHVTNAASPQINVDGLGAVFLRGSSGTNLGAGVLLAGTPYTAVYNSVNGEFTIHGFFGNPYNVPVGAGMLYFGLTAPNSSFAFPVGQAISRTTYITLFGVMGTTYGAGDGSTTFNLPDLTGRVPVMRDPGGIRISGLTFNSTDLGGSGGQQAIALSTANLPPYTPAGSVPSVSVSSTAQFTNNTGNVSVSAGGNPIPIPGGNSTVISNGSGTFSGTAQGGTSTPFSTVQPSVICNYAMRII
Physico‐chemical
properties
protein length:326 AA
molecular weight: 32879,12440 Da
isoelectric point:5,47714
aromaticity:0,08589
hydropathy:0,11166

Domains

Domains [InterPro]
IPR037053
144–204
IPR037053
SSF88874
146–325
SSF88874
IPR011083
156–209
IPR011083
WAX24428.1
1 326
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bradyrhizobium phage ppBeUSDA76-2
[NCBI] 		3003364 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAX24428.1 [NCBI]
Genbank nucleotide accession
OP596614.1 [NCBI]
CDS location
range 34991 -> 35971
strand +
CDS
ATGACTGGAGTTTTCAGTTGGTCGCAAACCGCGTCCAACAACGCTAATGCTGACCCTTCAGTTAACTGGGCTGAGGGGATGGCCCCCTCGGCCGTGAACGACAGTGCGCGCGCCATGATGGCTTCCACCGCAAAATGGCGGGACGACATTTCAGGCGCAATCGTCACGTCGGGGACCAGCACCCTCTATTCGGTCTCATCCAACCAAGGCTTTACGTCCTTGGCGGCGATGAATGGTCAAATCGTCGCCTTTACTCCGCATGTCACGAACGCAGCCAGCCCGCAAATAAACGTTGACGGCCTAGGGGCTGTATTCTTGCGAGGATCGTCAGGGACAAATCTTGGTGCTGGTGTTCTTCTCGCCGGCACTCCTTATACCGCCGTCTATAACAGCGTGAACGGCGAATTCACGATCCACGGCTTCTTCGGTAATCCGTACAATGTGCCCGTAGGAGCAGGGATGCTGTACTTTGGCCTTACGGCGCCGAATAGCTCGTTCGCGTTTCCTGTGGGCCAGGCGATTTCCCGGACTACCTACATCACCTTGTTTGGCGTGATGGGCACGACCTATGGAGCGGGGGATGGCAGCACGACGTTCAATCTTCCGGATCTGACAGGCCGTGTCCCTGTCATGCGAGATCCAGGCGGCATTCGCATTAGCGGCTTGACCTTCAACTCGACTGATCTTGGAGGAAGCGGCGGTCAACAGGCGATCGCGCTGAGCACCGCAAATCTGCCGCCGTATACGCCAGCTGGTTCCGTGCCGTCTGTGTCAGTTTCATCGACCGCTCAATTCACCAACAATACCGGTAATGTGAGCGTTTCCGCGGGCGGCAATCCGATCCCGATTCCTGGGGGCAATTCTACCGTTATCTCAAATGGCAGTGGCACGTTCTCCGGCACCGCGCAGGGGGGTACGAGCACACCGTTTAGCACGGTGCAGCCAAGCGTCATTTGCAACTACGCGATGAGGATCATCTGA

Tertiary structure

PDB ID
5521e0de62cca63170427a23a4882070516915e888dc5262e8f4463e51754c26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7592
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Spontaneously produced lysogenic phages are an important component of the soybean Bradyrhizobium mobilome Joglekar,P., Ferrell,B.D., Jarvis,T., Haramoto,K., Place,N., Dums,J.T., Polson,S.W., Wommack,K.E. and Fuhrmann,J.J. — — GenBank