Protein

View in Explore
Genbank accession
QDH46742.1 [GenBank]
Protein name
putative baseplate protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MKTMEDLAMSVESNVNFIPELNDQFPRKNDLIKEGDDHIRLVKKVLKNTLPGFNKALTITADSMNNFDKNIGFETDTVILKGAMRVDGSINVNGKKLTGLATPTADGDAVSWKFIKDLTTSIYNVTWPINSIYFTVDDRNPSVILGFGTWEKFGQGRVPIGTGTGVDGRSESKTFVNNGTGGMYSTVLTIDNLPQHTHQLNLDTVAGGDHKHDGGVAIRASSSQPFGKAAAHDELFSYEHHKYGEDVGTAWTNTVPGHTHKVQGNTVGTGGGIGFNTQNPYIGVSMWKRTA
Physico‐chemical
properties
protein length:291 AA
molecular weight: 31587,97110 Da
isoelectric point:6,35565
aromaticity:0,08247
hydropathy:-0,42302

Domains

View on InterPro
Domain architecture
QDH46742.1
1 291 aa
ATT 123–290 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QDH46742.1
1 291 aa
Domain Start End Length (AA) Confidence
N-terminal 1 114 114 0,9862
Central domain 115 280 167 0,0025
C-terminal 281 291 10 0,9974
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Aeromonas phage LAh_8 [NCBI] · taxon 2591032
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Aeromonas hydrophila [NCBI] · taxon 644
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Aeromonadales

Coding sequence (CDS)

Genbank protein accession
QDH46742.1 [NCBI]
Genbank nucleotide accession
MK838114 [NCBI]
CDS location
range 51759 -> 52634
strand +
CDS
TTGAAGACAATGGAGGATCTGGCTATGTCAGTAGAAAGTAATGTAAATTTTATACCAGAGCTGAATGATCAGTTCCCTCGAAAAAATGACTTGATCAAAGAGGGTGATGATCATATCAGGTTAGTTAAAAAAGTTCTGAAGAATACACTCCCAGGTTTTAACAAAGCTTTAACAATAACAGCAGACTCAATGAATAACTTCGATAAGAATATTGGATTTGAAACTGATACTGTTATCCTGAAAGGGGCTATGCGTGTAGACGGTTCTATAAACGTTAACGGTAAAAAGTTAACTGGATTAGCCACTCCAACTGCGGATGGTGATGCGGTTTCATGGAAGTTTATTAAAGATTTAACAACCTCTATTTATAATGTAACATGGCCTATCAATTCAATCTATTTCACTGTAGATGATCGAAACCCCTCCGTGATTCTTGGATTTGGTACTTGGGAGAAGTTTGGACAAGGTAGAGTCCCCATCGGTACTGGAACTGGTGTGGATGGTCGTAGCGAGTCTAAGACATTTGTAAATAATGGTACAGGTGGTATGTACTCAACTGTTCTAACTATTGACAACTTACCTCAGCATACTCACCAGTTGAATTTAGATACAGTAGCTGGTGGTGATCACAAGCACGATGGTGGCGTTGCAATAAGGGCTTCATCTTCACAACCTTTTGGAAAAGCGGCCGCCCATGACGAGTTATTCTCATATGAACATCACAAATATGGTGAGGATGTTGGAACTGCTTGGACAAACACTGTTCCAGGTCATACCCACAAAGTCCAAGGTAATACTGTTGGAACTGGTGGTGGTATTGGTTTCAATACACAAAATCCATATATCGGTGTCAGTATGTGGAAAAGAACTGCATAA

Genome Context

Tertiary structure

QDH46742.1
ESMFold structure
Source ESMFold
pLDDT 68.6
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Novel bacteriophages capable of disrupting biofilms from clinical strains of Aeromonas hydrophila with intrinsic antibiotic resistance Kabwe,M., Brown,T.L., Speirs,L., Ku,H., Leach,M., Chan,H.T., Petrovski,S., Lock,P. and Tucci,J. 2020-02-14 — GenBank