Phage RBP Database

Genbank accession

XPP57567.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,89

Protein sequence

MQITVTKALTEIKKLDKQIAKLTQHGQFILVSTRGRVAGFASVEEAGKAVKSNFDKIQALMKRRANIKAKVTASNAATKLTIAGSEMTVAEAIERKDSIEMEEHLLQVMKNQFNQAVNKQVRHEAQVQDEIDRKVEQVFGNAKKIDTNDGTYKAIREQVEAANKFELVDTNKLADQIEQLEDRIDDFRANVDVELSVSNATTSIEIDD

Physico‐chemical properties

protein length:	208 AA
molecular weight:	23260,07430 Da
isoelectric point:	5,77089
aromaticity:	0,03846
hydropathy:	-0,50769

Domain architecture

XPP57567.1

1 208 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil Coil

XPP57567.1

1208 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0027
STR

DC_0027

XPP57567.1

1208 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	5	25	Coils	Coil	-	-	-	-
Coil	Unmapped	-	170	197	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Vibrio phage Skimmer [NCBI] · taxon 3388595

Viruses

Host

Vibrio campbellii [NCBI] · taxon 680

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

XPP57567.1 [NCBI]

Genbank nucleotide accession

PQ768831.1 [NCBI]

CDS location

range 84072 -> 84698
strand +

CDS

ATGCAAATTACAGTAACTAAAGCACTTACTGAAATCAAAAAGCTAGATAAGCAAATTGCTAAACTTACCCAACATGGTCAGTTCATTCTAGTATCTACTCGTGGTCGTGTAGCGGGTTTCGCTTCTGTTGAAGAAGCTGGCAAAGCTGTTAAGAGCAACTTTGACAAAATTCAAGCTTTGATGAAGCGTCGTGCTAACATCAAAGCAAAAGTTACAGCATCTAACGCTGCAACTAAGCTAACAATCGCTGGTAGCGAAATGACAGTAGCGGAAGCGATTGAACGCAAAGACTCAATCGAGATGGAAGAACACCTTCTTCAAGTAATGAAGAATCAGTTCAACCAAGCTGTTAATAAACAGGTTCGTCACGAAGCACAAGTTCAAGACGAAATCGACCGTAAGGTTGAGCAAGTCTTCGGTAATGCGAAGAAAATCGACACCAACGATGGTACTTACAAGGCTATCCGTGAGCAAGTCGAAGCAGCTAACAAGTTTGAGCTTGTTGACACTAACAAGCTAGCGGATCAAATCGAGCAGTTGGAAGACCGCATCGACGACTTCCGTGCTAACGTTGACGTAGAGTTGTCCGTTTCTAACGCGACTACCAGTATCGAAATCGACGATTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)