Phage RBP Database

Genbank accession

YP_004849279.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,91

TF

Evidence RBPdetect2

Probability 0,98

Protein sequence

MVYKAKRSSRGVDPVSPASNLDWEPAFERYGEAAKVNSQLQSLKKDYETLANISNIAMARQNLSVYSKAETDVRYAFKAGAAGQVFAVAPATAGSHAVPRDQLPSLYPRAGAAPGIIALASQAEGYAGTVENKAIAPSVLKALTLYKSQNLADLPDKQLARANLGLASSAVLPENTWLKTASNLADVPNKAAARANLGITSSALLPESTWLKTASNLADVPNKPAARANLEITDTATLPVGDVMRKSQNLAGLTNVPQARANLGLGTMATANSGDFLTSANNLGDVRDAQAARNNLGLKGCATLDALGLPNGATGLDFQSEQSSSASGWAALPNGLILQWGQGPALYDDRSTIVRLPRQARILNVSVTVMGTFNASIGPGAYMTDQWSNTQFRVSCNWGNWAYPFCWFAITTIYGM

Physico‐chemical properties

protein length:	416 AA
molecular weight:	43908,04760 Da
isoelectric point:	9,10837
aromaticity:	0,07212
hydropathy:	-0,13798

Domain architecture

YP_004849279.1

1 416 aa

RBD 321–410 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil G3DSA:2.60.40.3940

YP_004849279.1

1416 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0761
STR

DC_0761

YP_004849279.1

1416 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	33	53	Coils	Coil	-	-	-	-
G3DSA:2.60.40.3940	RBD	G3DSA:2.60.40.3940	321	410	Merged direct domain	G3DSA:2.60.40.3940	C-terminal	Low	Positional only	77 proteins / 77 hits

Proteins with similar domain architecture

Phage

Pseudomonas phage KPP10 [NCBI] · taxon 582345

Uroviricota Caudoviricetes Vandenendeviridae Nankokuvirus KPP10

Host

Pseudomonas aeruginosa [NCBI] · taxon 287

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales

Genbank protein accession

YP_004849279.1 [NCBI]

Genbank nucleotide accession

NC_015272.2 [NCBI]

CDS location

range 18690 -> 19940
strand +

CDS

ATGGTGTACAAGGCCAAACGGTCCAGCCGAGGTGTTGACCCAGTATCTCCGGCAAGCAACCTGGACTGGGAACCCGCATTCGAGAGGTACGGTGAGGCTGCGAAAGTAAATTCTCAGCTTCAATCCTTGAAAAAGGATTATGAAACACTGGCCAATATCAGCAACATTGCCATGGCCAGGCAAAACCTCTCGGTATATTCCAAAGCCGAGACGGATGTCCGATATGCCTTCAAGGCTGGGGCAGCCGGGCAGGTGTTTGCTGTAGCCCCTGCCACCGCAGGGAGCCATGCAGTACCAAGGGATCAGTTGCCATCCTTGTACCCCCGAGCAGGCGCGGCGCCGGGTATTATCGCCCTGGCAAGCCAAGCGGAAGGATACGCAGGCACCGTTGAGAACAAGGCGATTGCACCGAGTGTCCTGAAAGCACTCACCCTGTATAAGAGCCAGAATCTGGCGGACCTCCCGGATAAGCAGCTTGCCCGGGCGAACCTGGGCCTGGCCAGCTCTGCTGTGTTGCCGGAAAACACCTGGTTGAAAACTGCTAGCAACCTGGCTGATGTCCCCAACAAAGCCGCAGCCCGTGCCAACTTGGGGATCACGTCTTCAGCGCTCCTCCCCGAGAGCACCTGGTTGAAAACTGCTAGCAACCTGGCTGATGTTCCTAACAAGCCCGCAGCACGGGCTAACCTGGAGATCACAGACACTGCTACGCTGCCGGTTGGCGACGTGATGCGTAAGAGTCAGAACCTGGCAGGGTTGACCAACGTTCCTCAAGCCCGTGCCAACTTGGGTTTGGGGACTATGGCAACTGCCAACTCGGGAGACTTCCTAACCTCGGCGAACAACCTTGGAGATGTCAGGGATGCACAAGCAGCCCGGAACAACCTGGGCTTGAAAGGATGTGCTACTCTGGACGCTCTGGGTCTACCGAACGGAGCAACTGGCCTAGACTTCCAATCGGAACAATCCTCCAGCGCATCCGGCTGGGCAGCTCTTCCGAACGGGTTGATCCTTCAGTGGGGTCAAGGCCCTGCACTGTACGATGATCGGTCTACGATTGTCCGGCTGCCACGCCAGGCTCGAATCCTGAACGTGAGCGTAACTGTGATGGGCACTTTCAACGCCTCTATCGGGCCTGGCGCCTACATGACGGACCAGTGGAGTAATACTCAGTTCCGTGTATCGTGCAACTGGGGCAACTGGGCGTATCCGTTCTGCTGGTTCGCTATCACCACCATCTACGGGATGTAG

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)