Protein

View in Explore
Genbank accession
XNT20181.1 [GenBank]
Protein name
variable tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MTTNTPKYGGLLTDIGAAALAAASAAGKKWQPTHMLIGDAGGAPGDTPDPLPSAAQKSLINQRHRAQLNRLFVSDKNANTLVAEVVLPVEVGGFWIREIGLQDADGKFVAVSNCPPSYKAAMESGSARTQTIRVNIALSGLENVQLLIDNGIIYATQDWVKEKVAADFKGRKILAGNGLVGGGDLSADRSIGLAPSGVTAGSYRSVTVNANGVVTQGSNPSTLAGYAIGDAYTKADTDGKLAQKANKATTLAGYGITDALRVDGNAVSSSRLAAPRSLAASGDASWSVTFDGSANVSAPLSLSATGVAAGSYPKVTVDTKGRVTAGMALAATDIPGLDASKLVSGVLAEQRLPVFARGLATAVSTTSDPNTATVPLMLTNHANGPVAGRYFYIQSMFYPDQNGNASQIATSYNATSEMYVRVSYAANPSARDWLPWKRCDIGGSFSKEADGALGGAVNLNSLITSGWWYQTANAQAESGANYPVPRAGLLQVHNAGTNFIYQTYQVYDGEGFYFRCRYTNTWYPWRRVWHGADFNPNDYLLKSGFTWAALPGKPATFPPTGHNHDAAQITSGILPLARGGLGSNTAAGARNNIGAGVPATANRSLNGWWKDNDTGLIVQWMTVSVGDHPGGIVNRSLTFPIAFPTTCLHVVPSVKELGRPATSASTVTLADVSVSTTGCVIVATEYHGAVQNYAIRLVAIGC
Physico‐chemical
properties
protein length:702 AA
molecular weight: 73273,37660 Da
isoelectric point:8,77732
aromaticity:0,08120
hydropathy:-0,07379

Domains

Domains [InterPro]
IPR051934
1–649
IPR051934
IPR022225
7–158
IPR022225 cd19958 cd19958 G3DSA:2.60.40.3940
IPR054075
613–701
IPR054075
XNT20181.1
1 702
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp.
[NCBI] 		2729638 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNT20181.1 [NCBI]
Genbank nucleotide accession
OQ658366.1 [NCBI]
CDS location
range 10324 -> 12432
strand -
CDS
ATGACGACCAATACTCCGAAATACGGTGGCCTGCTCACCGACATAGGTGCCGCTGCGCTGGCTGCGGCCAGCGCAGCAGGCAAGAAATGGCAGCCGACTCATATGCTGATCGGCGATGCCGGCGGTGCGCCGGGCGACACGCCGGATCCATTGCCTTCTGCGGCGCAGAAGAGCCTGATCAACCAACGCCATCGGGCTCAGCTGAATCGGCTGTTCGTTTCCGACAAGAACGCCAATACCTTGGTTGCCGAGGTGGTGCTGCCAGTTGAGGTAGGTGGCTTCTGGATCCGCGAGATCGGCCTGCAGGATGCCGACGGCAAGTTCGTCGCGGTATCCAACTGCCCGCCCAGCTACAAAGCTGCAATGGAAAGTGGCAGTGCGCGGACCCAGACCATTCGGGTGAACATCGCGCTCTCCGGCCTGGAGAATGTCCAGCTGCTGATCGACAACGGCATCATCTACGCCACTCAGGACTGGGTGAAGGAAAAGGTCGCTGCCGATTTCAAGGGCCGCAAGATTCTGGCTGGCAATGGCCTGGTCGGTGGGGGCGATCTTTCTGCCGACCGCAGCATTGGCCTGGCGCCTTCCGGCGTGACGGCGGGCAGCTATCGCTCGGTCACGGTGAACGCCAACGGGGTGGTCACCCAGGGCAGCAATCCGAGCACCCTGGCCGGCTATGCGATCGGAGATGCCTATACCAAGGCCGATACCGACGGAAAACTGGCGCAGAAAGCGAACAAGGCCACCACCCTGGCCGGCTATGGCATCACCGATGCGCTGCGAGTCGATGGCAACGCCGTGTCATCCAGCAGGCTGGCCGCACCGCGTAGCCTGGCAGCCAGTGGCGATGCCTCCTGGTCGGTGACCTTCGACGGCAGTGCCAATGTTTCTGCGCCGCTGAGTCTTTCCGCTACCGGTGTGGCAGCGGGCAGCTATCCGAAGGTGACCGTGGATACGAAAGGAAGGGTGACTGCTGGAATGGCGCTGGCGGCGACGGACATTCCCGGGCTGGATGCTTCGAAGTTGGTCAGCGGGGTGCTGGCCGAGCAGCGTTTGCCGGTATTCGCGCGCGGGTTGGCTACTGCTGTCTCGACCACTAGCGATCCGAACACCGCGACCGTGCCGTTGATGCTGACCAATCATGCGAACGGACCTGTTGCCGGACGGTACTTCTACATCCAGTCGATGTTCTATCCGGATCAGAACGGCAATGCTTCGCAGATTGCAACGAGCTACAACGCTACATCCGAGATGTATGTACGGGTGTCCTACGCGGCCAACCCTAGCGCCCGGGACTGGCTGCCCTGGAAGCGCTGCGACATAGGTGGTTCGTTCAGCAAGGAGGCGGACGGGGCCTTGGGCGGTGCGGTCAATCTCAACTCGCTGATCACGTCGGGATGGTGGTACCAGACGGCCAATGCACAGGCCGAAAGTGGGGCGAACTACCCGGTCCCCCGGGCCGGCTTGCTTCAAGTGCATAATGCAGGCACCAATTTCATCTACCAGACATACCAGGTTTACGACGGTGAAGGGTTCTATTTTCGTTGCCGCTACACCAACACCTGGTATCCATGGCGGCGTGTATGGCATGGGGCGGACTTCAATCCGAACGACTATCTGCTGAAAAGTGGCTTTACGTGGGCCGCCCTGCCAGGAAAGCCGGCGACCTTTCCGCCTACTGGCCACAACCACGACGCCGCCCAGATCACGTCGGGCATCCTGCCTCTGGCGCGCGGCGGTCTTGGTTCGAATACGGCAGCGGGGGCGCGCAACAATATCGGGGCTGGGGTTCCCGCGACGGCGAACCGATCGCTGAATGGCTGGTGGAAGGATAACGATACAGGACTCATCGTGCAGTGGATGACAGTGAGTGTCGGCGATCATCCGGGTGGAATCGTCAACCGCTCGCTGACCTTTCCGATCGCGTTTCCCACTACCTGCCTGCACGTGGTGCCGAGCGTCAAGGAACTGGGGCGGCCGGCGACGTCGGCATCGACCGTCACCCTCGCAGATGTCAGCGTCAGCACCACGGGGTGTGTGATTGTCGCTACCGAGTATCACGGTGCGGTCCAGAACTATGCGATCAGGCTTGTGGCCATTGGCTGTTGA

Tertiary structure

PDB ID
ef6cf51d743c909928b3c9eac5cf0f2297904842a0eb582ac1a172832bd1f935
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7548
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50