Protein

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Genbank accession
CBX88967.1 [GenBank]
Protein name
putative viral baseplate protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEDKELVPAPFTIVIEDSDGALDANVGNGNKVTIAIGSTQESLANFVTGYVRQVQVQRRDTGIKEITLNGFSSVIRLDERIGNFYRIAARQANGVDPDPDDPNMKCGEIFRDIFEDTDHLPLGQPLESFSTGGINDIGEHLASIKEPFVEWKQIADRIMEASGTVYGIDADDVAFLRYPTLAHSGITIRSMPTAADPDETTGYFVGSWGYTDSIKKSDGFSNRLYGRGGTQLLLDVDRFADNASVECHSKDRAVQFTASAPRLDSVSLVLSKTGTLATDIAGEIRLDDGNNTPGGEAVGTFSVFRNLIGASAAAVNRVNISMHSNLLQVDKKYWIVIKKSGDASNHVRWHHDNGTSGVNAERASSTWTVNTSSYVLAHRTYFSRRVLAEASDQKSIDRYGLVESVVDAPWIIEGQTMDAYLTAMLQYSALQHRVYDVKKIYAPATLINAGKLARLVDETSGIDSDAEIVMSRYRFRADESGLGTRYAEVQLQGYVR
Physico‐chemical
properties
protein length:496 AA
molecular weight: 54375,98180 Da
isoelectric point:5,09240
aromaticity:0,08266
hydropathy:-0,29798

Domains

View on InterPro
Domain architecture
CBX88967.1
1 496 aa
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
CBX88967.1
1 496 aa
Domain Start End Length (AA) Confidence
N-terminal 1 81 81 0,9841
Central domain 82 280 200 0,2462
C-terminal 281 496 215 0,7144
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Nitrososphaera phage Pro-Nvie1 [NCBI] · taxon 927392
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Candidatus Nitrososphaera sp. EN76 [NCBI] · taxon 926571
Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera viennensis

Coding sequence (CDS)

Genbank protein accession
CBX88967.1 [NCBI]
Genbank nucleotide accession
FR725450 [NCBI]
CDS location
range 15831 -> 17321
strand +
CDS
GTGGAGGACAAGGAACTCGTGCCGGCGCCCTTTACGATAGTGATAGAGGACAGCGATGGCGCGCTTGATGCAAATGTCGGAAACGGCAACAAAGTCACCATTGCCATCGGCAGCACGCAGGAGAGCCTTGCAAACTTTGTCACCGGCTACGTGCGGCAGGTGCAGGTCCAGAGGCGCGACACCGGGATAAAGGAGATAACCCTCAATGGCTTTAGCTCGGTAATCCGCCTTGACGAGCGGATCGGCAACTTTTACAGGATAGCCGCAAGGCAGGCAAACGGCGTCGATCCTGACCCTGACGACCCGAACATGAAGTGCGGCGAGATATTCCGGGACATCTTTGAAGATACAGACCACCTGCCTCTTGGCCAGCCCCTCGAGTCTTTTTCCACGGGCGGGATAAACGACATCGGCGAGCACCTTGCCTCGATAAAAGAGCCTTTCGTGGAATGGAAGCAGATAGCTGACAGAATAATGGAAGCTTCTGGCACGGTGTACGGCATCGACGCAGACGATGTCGCCTTTCTCCGCTACCCTACCCTTGCGCACAGCGGGATAACCATCCGCAGCATGCCGACCGCTGCCGACCCTGATGAGACAACAGGCTACTTTGTCGGCTCGTGGGGCTACACCGACTCTATAAAAAAGAGCGACGGCTTTTCAAACCGCCTGTACGGGCGGGGCGGCACCCAGCTCCTGCTTGACGTCGACAGGTTTGCAGACAATGCGTCCGTCGAGTGCCATTCAAAGGACCGCGCTGTACAGTTCACTGCGTCCGCGCCGCGCCTTGACAGCGTGTCCCTCGTCCTTTCAAAAACGGGCACGCTTGCGACAGACATCGCCGGCGAGATCCGTCTGGACGACGGAAACAACACGCCAGGCGGCGAGGCCGTGGGGACGTTCTCGGTGTTCCGCAACCTCATAGGCGCGTCTGCCGCGGCTGTAAACCGCGTCAACATCTCTATGCACAGCAACCTGCTGCAGGTGGACAAGAAATACTGGATAGTGATCAAAAAGTCTGGCGACGCGTCAAACCATGTCAGGTGGCACCACGACAACGGCACGTCCGGCGTCAACGCCGAAAGGGCTTCGTCGACCTGGACCGTCAACACTTCAAGCTACGTTCTGGCGCACCGCACGTATTTTAGCCGGAGGGTGCTTGCCGAGGCGTCGGACCAGAAATCCATCGACAGGTATGGCCTTGTCGAGTCAGTGGTGGACGCGCCGTGGATAATCGAGGGGCAGACGATGGACGCGTACCTGACTGCGATGCTGCAGTATTCTGCCCTGCAGCACCGCGTCTACGACGTGAAGAAGATCTACGCGCCTGCGACCCTGATAAACGCAGGCAAGCTTGCGCGGCTTGTGGACGAGACCTCCGGCATAGACTCTGACGCGGAGATAGTGATGTCGCGCTACCGCTTCCGGGCTGACGAAAGCGGCCTTGGCACCCGCTATGCCGAGGTCCAGCTGCAAGGGTACGTGCGCTAG

Genome Context

Tertiary structure

CBX88967.1
ESMFold structure
Source ESMFold
pLDDT 80.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A thaumarchaeal provirus testifies for an ancient association of tailed viruses with archaea Krupovic,M., Spang,A., Gribaldo,S., Forterre,P. and Schleper,C. 2011 21265751 GenBank