Protein

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Genbank accession
CBX88967.1 [GenBank]
Protein name
putative viral baseplate protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEDKELVPAPFTIVIEDSDGALDANVGNGNKVTIAIGSTQESLANFVTGYVRQVQVQRRDTGIKEITLNGFSSVIRLDERIGNFYRIAARQANGVDPDPDDPNMKCGEIFRDIFEDTDHLPLGQPLESFSTGGINDIGEHLASIKEPFVEWKQIADRIMEASGTVYGIDADDVAFLRYPTLAHSGITIRSMPTAADPDETTGYFVGSWGYTDSIKKSDGFSNRLYGRGGTQLLLDVDRFADNASVECHSKDRAVQFTASAPRLDSVSLVLSKTGTLATDIAGEIRLDDGNNTPGGEAVGTFSVFRNLIGASAAAVNRVNISMHSNLLQVDKKYWIVIKKSGDASNHVRWHHDNGTSGVNAERASSTWTVNTSSYVLAHRTYFSRRVLAEASDQKSIDRYGLVESVVDAPWIIEGQTMDAYLTAMLQYSALQHRVYDVKKIYAPATLINAGKLARLVDETSGIDSDAEIVMSRYRFRADESGLGTRYAEVQLQGYVR
Physico‐chemical
properties
protein length:496 AA
molecular weight: 54375,98180 Da
isoelectric point:5,09240
aromaticity:0,08266
hydropathy:-0,29798

Domains

Domains [InterPro]
NF041539
248–373
NF041539
CBX88967.1
1 496
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Nitrososphaera phage Pro-Nvie1
[NCBI] 		927392 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CBX88967.1 [NCBI]
Genbank nucleotide accession
FR725450 [NCBI]
CDS location
range 15831 -> 17321
strand +
CDS
GTGGAGGACAAGGAACTCGTGCCGGCGCCCTTTACGATAGTGATAGAGGACAGCGATGGCGCGCTTGATGCAAATGTCGGAAACGGCAACAAAGTCACCATTGCCATCGGCAGCACGCAGGAGAGCCTTGCAAACTTTGTCACCGGCTACGTGCGGCAGGTGCAGGTCCAGAGGCGCGACACCGGGATAAAGGAGATAACCCTCAATGGCTTTAGCTCGGTAATCCGCCTTGACGAGCGGATCGGCAACTTTTACAGGATAGCCGCAAGGCAGGCAAACGGCGTCGATCCTGACCCTGACGACCCGAACATGAAGTGCGGCGAGATATTCCGGGACATCTTTGAAGATACAGACCACCTGCCTCTTGGCCAGCCCCTCGAGTCTTTTTCCACGGGCGGGATAAACGACATCGGCGAGCACCTTGCCTCGATAAAAGAGCCTTTCGTGGAATGGAAGCAGATAGCTGACAGAATAATGGAAGCTTCTGGCACGGTGTACGGCATCGACGCAGACGATGTCGCCTTTCTCCGCTACCCTACCCTTGCGCACAGCGGGATAACCATCCGCAGCATGCCGACCGCTGCCGACCCTGATGAGACAACAGGCTACTTTGTCGGCTCGTGGGGCTACACCGACTCTATAAAAAAGAGCGACGGCTTTTCAAACCGCCTGTACGGGCGGGGCGGCACCCAGCTCCTGCTTGACGTCGACAGGTTTGCAGACAATGCGTCCGTCGAGTGCCATTCAAAGGACCGCGCTGTACAGTTCACTGCGTCCGCGCCGCGCCTTGACAGCGTGTCCCTCGTCCTTTCAAAAACGGGCACGCTTGCGACAGACATCGCCGGCGAGATCCGTCTGGACGACGGAAACAACACGCCAGGCGGCGAGGCCGTGGGGACGTTCTCGGTGTTCCGCAACCTCATAGGCGCGTCTGCCGCGGCTGTAAACCGCGTCAACATCTCTATGCACAGCAACCTGCTGCAGGTGGACAAGAAATACTGGATAGTGATCAAAAAGTCTGGCGACGCGTCAAACCATGTCAGGTGGCACCACGACAACGGCACGTCCGGCGTCAACGCCGAAAGGGCTTCGTCGACCTGGACCGTCAACACTTCAAGCTACGTTCTGGCGCACCGCACGTATTTTAGCCGGAGGGTGCTTGCCGAGGCGTCGGACCAGAAATCCATCGACAGGTATGGCCTTGTCGAGTCAGTGGTGGACGCGCCGTGGATAATCGAGGGGCAGACGATGGACGCGTACCTGACTGCGATGCTGCAGTATTCTGCCCTGCAGCACCGCGTCTACGACGTGAAGAAGATCTACGCGCCTGCGACCCTGATAAACGCAGGCAAGCTTGCGCGGCTTGTGGACGAGACCTCCGGCATAGACTCTGACGCGGAGATAGTGATGTCGCGCTACCGCTTCCGGGCTGACGAAAGCGGCCTTGGCACCCGCTATGCCGAGGTCCAGCTGCAAGGGTACGTGCGCTAG

Tertiary structure

PDB ID
40199d20c9bd5ed4d5c052b3dce405b468d31ba07818bbca246bbbdb38d1b6bd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8071
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A thaumarchaeal provirus testifies for an ancient association of tailed viruses with archaea Krupovic,M., Spang,A., Gribaldo,S., Forterre,P. and Schleper,C. 2011 21265751 GenBank