Phage RBP Database

Genbank accession

AMO43040.1 [GenBank]

Protein name

short tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,75

TF

Evidence RBPdetect2

Probability 0,78

Protein sequence

MPFYQESKTARAAAIGTIMPWTGNISSIPAGWIICDGSSIPAADYPLLARAMQDTYNSGTTSTFAGTFPNYSGNIVLPSILNRPVCDIETQYFGSSSPITSDAGEVHRNNIAATEITPYIGPNTDNGINTTWNDVSTDVIFTLNERNQTPEGLPYYSGRLRGNVIADGSGQGSKIMYFGPRKLGRGHLRSHKHGGRTLPSINPSPATRPGDGVIPWSNISFDFGLAVKDEQPGPQGDELFVSFSTTGFERGKNGFGQGRQGRTVAGVNAENPPVNFTPRNVIWNPIKTAITEPSNVRSINGSTVNALSGGISGYSGNGEARPVKYGIGGEDVTLPIGYTDFYPDASTAVVYGTLNSNAGWEFTRTTASVGMSDVIRTHTHDEFDVTFELSGLRPNTTINVNVTAPASNLNLDNTRNQGVLQVNFNTTQPGVTTLYLIRAY

Physico‐chemical properties

protein length:	440 AA
molecular weight:	47133,62470 Da
isoelectric point:	5,73013
aromaticity:	0,09091
hydropathy:	-0,35750

Domain architecture

AMO43040.1

1 440 aa

ATT 4–85 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR037053
ATT

IPR037053

IPR037053
ATT

IPR037053

SSF88874
STR

SSF88874

IPR011083
ATT

IPR011083

AMO43040.1

1440 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0344
STR

DC_0344

AMO43040.1

1440 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR037053	ATT	IPR037053	4	71	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR037053	ATT	IPR037053	4	85	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	9	75	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	16	75	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits

Proteins with similar domain architecture

Phage

Cyanophage S-RIM32 [NCBI] · taxon 1278479

Uroviricota Caudoviricetes Pantevenvirales Bristolvirus Bristolvirus rhodeisland

Host

Synechococcus sp. [NCBI] · taxon 1131

cellular organisms Bacteria Bacillati Cyanobacteriota/Melainabacteria group Cyanobacteriota Cyanophyceae

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)