Protein

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Genbank accession
QIN98357.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence Phold
Probability 1,00
Protein sequence
MATEVDPELQAQLDKLTIAVQLIHDFGMSDDPSIPNPEGGVIRTLEGINAAINEAIPNFEDANEAAIQARAARDAAIEAKEAAETAAEQATAASTSAIYEYGNVASAATVTIPAATKTVVSLTLNQPNTVINIGGVSDPSTVARQITIALKQGTGSNKVSSWDSRIKWANNRKPVLSYLVGYTDVVTLLTFDSGATWMGFFNGGWIK
Physico‐chemical
properties
protein length:207 AA
molecular weight: 21824,17290 Da
isoelectric point:4,55055
aromaticity:0,06280
hydropathy:-0,03043

Domains

Domains [InterPro]
Coil
73–93
Coil
QIN98357.1
1 207
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage brorfarstad
[NCBI] 		2713286 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN98357.1 [NCBI]
Genbank nucleotide accession
MT074435 [NCBI]
CDS location
range 47978 -> 48601
strand -
CDS
ATGGCAACTGAAGTAGACCCGGAACTGCAAGCGCAGCTGGATAAGCTAACCATTGCTGTCCAGCTCATTCATGACTTCGGTATGTCAGACGACCCAAGCATTCCTAACCCGGAAGGCGGTGTCATACGTACACTCGAAGGCATTAACGCTGCAATCAATGAAGCTATACCAAACTTTGAAGATGCTAACGAAGCAGCTATCCAGGCACGAGCTGCACGTGACGCAGCTATTGAAGCCAAAGAGGCAGCAGAAACTGCAGCTGAACAGGCTACAGCAGCTTCAACGTCAGCAATCTACGAATACGGCAACGTTGCTAGCGCAGCTACCGTAACTATACCAGCTGCAACTAAAACAGTTGTCAGTCTTACACTAAACCAGCCTAACACTGTAATTAACATTGGTGGCGTGTCTGACCCGTCTACTGTTGCGCGTCAGATTACTATTGCTCTTAAGCAGGGCACTGGTTCTAACAAGGTGTCTTCCTGGGACTCCAGAATAAAATGGGCCAACAACAGAAAGCCTGTTCTGTCGTACCTTGTGGGTTACACCGATGTTGTTACGTTGCTGACCTTCGACTCAGGCGCAACTTGGATGGGCTTCTTTAACGGTGGATGGATTAAATAA

Tertiary structure

PDB ID
775ace42322c5a8b8b99e1dc707ee583bdbeafffb0e87f683033adc30f0cf437
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9156
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank