Protein

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Genbank accession
AYP68602.1 [GenBank]
Protein name
carbohydrate binding domain protein
RBP type
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MPVVATGQLTLTDLNDAIIGGSAPTNPIVDTLWIDSSTSPPKLKKWSGSAWVIQNLSIADLDPNKDQIITDSQQALSNLSNDARITQAERKEVKEAMMKITGVIIANTSNAPTTATMDSSAKGDFYSARKKALNAGLASNHADYVDIATKYNTLVAYLNALSPKPWDTASTAVITVVADTWRNHWLNYYTAYNKLEETVATKLKDNVDSIVVGGRNLLRDSNHLTLTPGMQAVWQAWGGNTATVSYTTDTPTEFSTGNSIRIQVTTKGTGGSYVDLDTFTLQAGKTYTMSFYAKSQSGTIAHQAHLASLNRISDNIYITSGTSFIVPTAWTRFSYQFTVTTSTAGVYRRRHIVYDVDTIWLSHVQLEEGNKVTDWKPSPDDTPNLAPGAGRNLLRNTDFAEIEEVSYGWDKNLNGTQGPTRWSLYNSGVPVPATGWHANLYTDFGYPVIRFNDRNSTITGAGTHRWMAATQNLRLDEDFCTSIQAGKTYVLSMEVRADTLNMRLNVGFHHYTYSGGTTRGFYGYQWFLNPSMSTNIWEKKYVTFTIDNAWDITKDALMYVYGHNSSPEGTMYVKNIMLEEGVFPSAWRVSGMDNNFRITTLENDLTDIKEITKPDGLYTQIKQSQNYINEVEGYALASDLEGLATSDGVKSEIEEAIKPYKEFLEDLDTSPYVKQAEYEQTVERFQSRFTSGGGANLLQNSVGFNDFNFWSRTSNNMVPNSGMFENTSGFTLAAGWTRDTTDTFYGIPSGKCVVSGLSADAWRGWFTPYFPATPGRVFTGSFWVMFKSGANIDRSVAMELEWFNGTTRISTASLVIPVNMDGKWRRFTVTGTTPTNTTQFRLRIHCTRNGTFWASAPQVEESPTVSPYGLEMSETTWRGYTRQNDTLQTIGTGSSMMVQTGGRFVQTVTLPPLTETDAQNKIILIPFTFSVMTKLWNGGQGYIRVYDGSSMSNNYQEAQIVDGEYKKHGITVIPSSGTITVEIGAHEGEVEFTGAMLNVGDVAYQWQQNTRESHNATIRQDITGIKVFKNNADGTIESMTAMTPDKFAGYYDTNQDGIIDTNKDSVDEVFRMDKDEFLMKKAVVKDEITMGNIKIVNTPTGWAIVGLD
Physico‐chemical
properties
protein length:1108 AA
molecular weight: 123009,85490 Da
isoelectric point:5,26383
aromaticity:0,10740
hydropathy:-0,38601

Domains

Domains [InterPro]
Coil
76–96
Coil G3DSA:2.60.120.260 G3DSA:2.60.120.260 G3DSA:2.60.120.260
IPR008979
232–343
IPR008979
IPR003305
233–344
IPR003305
AYP68602.1
1 1108
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Exiguobacterium phage vB_EalM-132
[NCBI] 		2419623 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYP68602.1 [NCBI]
Genbank nucleotide accession
MH884511 [NCBI]
CDS location
range 75912 -> 79238
strand +
CDS
ATGCCAGTAGTAGCAACAGGACAGCTTACACTAACTGACTTAAATGATGCTATTATAGGAGGGTCAGCACCTACTAACCCTATAGTAGATACATTATGGATTGATAGTTCAACTTCACCACCTAAATTAAAGAAGTGGTCAGGTTCAGCATGGGTAATACAGAATTTATCAATTGCTGATTTAGACCCTAACAAAGACCAAATTATTACAGATAGTCAACAAGCTCTATCTAACTTGTCTAATGATGCTCGTATCACACAGGCAGAACGTAAAGAAGTTAAAGAAGCTATGATGAAAATCACGGGTGTTATTATTGCTAACACTTCTAACGCCCCTACTACAGCTACTATGGACTCCTCTGCAAAAGGTGATTTCTATAGTGCTCGTAAAAAGGCTTTAAACGCAGGTTTGGCAAGTAACCATGCAGATTATGTAGATATAGCTACTAAATATAACACTTTAGTCGCTTATTTAAATGCGCTTTCTCCTAAGCCTTGGGACACGGCTAGTACAGCAGTTATCACAGTCGTGGCAGATACATGGAGAAACCATTGGTTAAACTATTATACTGCGTATAATAAATTAGAAGAAACAGTAGCCACCAAGTTAAAAGATAATGTAGACAGTATTGTAGTCGGTGGTAGAAACCTTTTAAGAGATAGTAACCACTTAACTCTAACTCCTGGTATGCAAGCTGTATGGCAAGCATGGGGTGGAAATACCGCAACAGTATCATACACTACAGATACTCCTACTGAATTTTCTACAGGTAATAGTATTAGAATTCAAGTTACTACAAAAGGTACCGGAGGTTCTTATGTAGATTTAGATACATTTACTCTACAAGCGGGAAAAACGTATACTATGAGTTTCTATGCAAAATCTCAGAGTGGTACAATCGCTCACCAAGCACACTTAGCCTCTCTTAACCGTATTTCAGATAACATATATATAACTAGCGGTACAAGCTTCATAGTACCAACTGCATGGACTCGATTTAGCTACCAGTTTACTGTCACGACGTCAACAGCAGGAGTATACCGACGCAGACACATAGTGTATGATGTAGATACGATTTGGTTGTCTCATGTCCAGTTAGAAGAAGGTAATAAAGTTACAGACTGGAAACCGTCTCCAGACGATACACCTAACTTAGCCCCTGGGGCAGGTAGAAACCTCTTACGAAACACAGACTTTGCAGAAATTGAGGAAGTCAGCTACGGTTGGGATAAGAATCTTAATGGTACACAGGGACCAACTAGATGGAGTTTGTATAATAGTGGAGTACCCGTTCCTGCTACGGGGTGGCATGCAAACTTATATACGGATTTTGGATACCCAGTTATACGTTTTAATGACCGCAACTCGACTATCACTGGGGCAGGTACCCACCGATGGATGGCGGCTACTCAGAATCTTAGACTGGATGAAGATTTTTGTACCTCTATTCAGGCAGGTAAGACATATGTACTTAGTATGGAAGTTCGTGCAGATACTTTGAACATGAGGTTAAATGTTGGTTTCCACCACTACACTTATAGTGGAGGTACTACTAGAGGATTCTATGGATACCAGTGGTTCCTAAATCCTTCTATGAGCACAAATATCTGGGAGAAAAAATATGTCACCTTTACTATCGACAATGCTTGGGATATTACCAAAGATGCTTTAATGTACGTCTATGGGCATAACAGTTCTCCAGAAGGTACTATGTACGTGAAGAACATTATGCTTGAAGAAGGGGTATTCCCTTCTGCATGGAGAGTATCTGGTATGGATAACAACTTCCGCATTACTACTCTAGAAAATGACTTAACTGATATAAAAGAGATTACTAAACCTGATGGTTTATACACTCAGATTAAGCAATCTCAGAACTATATCAACGAGGTTGAGGGCTATGCACTAGCTAGTGACTTGGAAGGTTTAGCTACTTCTGATGGAGTTAAGTCAGAAATTGAAGAAGCGATTAAACCATATAAAGAGTTCTTAGAAGATTTAGACACTTCTCCTTACGTCAAGCAGGCGGAATACGAACAGACTGTAGAGAGGTTTCAATCTAGGTTCACTTCAGGCGGGGGAGCAAACTTACTACAAAACTCTGTAGGATTTAATGATTTTAACTTCTGGTCTAGAACAAGTAATAACATGGTACCTAACTCTGGAATGTTTGAAAACACTTCAGGGTTTACCCTAGCCGCAGGATGGACAAGAGATACTACAGACACTTTCTACGGTATTCCATCCGGCAAGTGTGTAGTATCAGGTTTATCGGCTGATGCGTGGCGAGGATGGTTTACTCCATATTTCCCTGCTACTCCAGGTAGGGTATTTACTGGCAGTTTTTGGGTCATGTTTAAGAGTGGTGCTAATATAGATCGTAGTGTTGCTATGGAATTAGAGTGGTTTAATGGTACTACTAGAATCAGTACGGCGTCACTCGTAATTCCAGTTAACATGGACGGTAAGTGGAGAAGATTTACTGTGACAGGGACTACTCCTACTAACACTACGCAATTTAGATTACGTATACATTGTACAAGAAATGGTACCTTCTGGGCATCAGCACCTCAAGTGGAAGAAAGCCCAACGGTTAGTCCCTATGGGCTTGAAATGTCTGAAACTACTTGGAGAGGATACACCCGCCAGAATGACACCTTACAGACTATCGGTACAGGTAGCTCTATGATGGTGCAGACAGGGGGAAGATTCGTCCAAACGGTTACCCTACCTCCCCTAACAGAAACAGACGCACAGAATAAAATTATCCTAATTCCATTTACTTTTAGTGTAATGACTAAGTTGTGGAATGGTGGTCAGGGTTATATTAGAGTTTATGATGGAAGCTCTATGAGTAACAACTACCAAGAAGCTCAGATTGTTGATGGAGAGTATAAAAAACATGGCATAACAGTTATACCAAGTTCAGGTACTATTACTGTAGAAATTGGTGCACATGAAGGAGAAGTTGAGTTTACAGGGGCTATGCTAAATGTTGGAGACGTAGCTTATCAGTGGCAACAAAATACTAGAGAGTCTCACAACGCTACTATCCGACAAGATATTACTGGTATTAAGGTCTTTAAGAATAATGCTGATGGCACTATTGAAAGTATGACTGCCATGACTCCTGACAAGTTCGCAGGATACTATGATACTAACCAAGATGGTATTATAGATACTAACAAAGACTCTGTAGATGAAGTATTCCGTATGGATAAGGATGAGTTTCTTATGAAAAAAGCCGTAGTAAAAGATGAGATAACTATGGGTAACATTAAAATCGTCAACACACCTACAGGTTGGGCTATAGTAGGTCTTGACTAA

Tertiary structure

PDB ID
f2e17714efded1170a6f970cc8788fca880936fbbaa59e7cb52f92e378156090
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2292
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Comparative Genomic Analysis of Eight Novel Haloalkaliphilic Bacteriophages from Lake Elmenteita, Kenya Akhwale,J.K. — — GenBank