Phage RBP Database

Genbank accession

XEN39323.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,89

TF

Evidence RBPdetect2

Probability 0,94

Protein sequence

MAENELYGHDGRGHFKGVSLVEVPQNKSLIFTDILTTDSALNPSKLSSSQEYGRGFLIQASKEGALSHLGITPEMLTPGTQGPAGPKGDPGPQGLQGIQGPKGDPGADGEPGPQGLQGPAGPQGPIGPGGEGSIGPKGDKGDPGPQGLQGIQGPAGEPGIQGPIGPIGPAGLVWRGQWNSIENYEADMAVGYQGASYFAVRANTGVSPLTSAADWALLASMGATGPQGPVGQTGPQGPQGIQGPQGLDGAGIVWRGQWFNGQVYNKNDCVYDLGSSYICSGGGHIASEQNRPTSETSIFWDYVAKKGEEGLQGIQGPTGQRGATGPAGPKGDTGIAGPQGVQGERGIQGIQGPAGPTGSQGPVGPKGDKGEDAVFDVESLTQSQLQTLYNKLLAFHPTRYWRDSVKFPFPYDTTVEKILPLWAFNFKLHFKMISYYSFEIRVSNQGGSGRYDIKKMTEYDGAGLECLSFVDKLFASNPEVFDAVSFTQSREFNRYEIFDRATRKWYTLSLYAVGSLHPSSTEEVEIFVSIEDKTAGGKF

Physico‐chemical properties

protein length:	539 AA
molecular weight:	56748,32330 Da
isoelectric point:	5,07756
aromaticity:	0,09276
hydropathy:	-0,47699

Domain architecture

XEN39323.1

1 539 aa

STR 70–140 · STR 176–301 · STR 314–370 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR008160
STR

IPR008160 G3DSA:2.10.10.90 IPR008160

IPR008160
STR

IPR008160

IPR050149
Unmapped

IPR050149

XEN39323.1

1539 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0518
ATT

DC_0518 DC_1060 DC_1819

DC_0588
RBD

DC_0588

XEN39323.1

1539 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR008160	STR	DC_0536	70	140	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR008160	STR	DC_0536	78	130	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR050149	Unmapped	-	78	370	InterPro	Collagen superfamily	-	-	-	-
G3DSA:2.10.10.90	STR	G3DSA:2.10.10.90	176	301	Merged direct domain	G3DSA:2.10.10.90	Central	Low	Positional only	29 proteins / 29 hits
IPR008160	STR	DC_0536	314	370	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits

Proteins with similar domain architecture

Phage

Salmonella phage BP13076 [NCBI] · taxon 3241510

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Salmonella enterica [NCBI] · taxon 28901

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

XEN39323.1 [NCBI]

Genbank nucleotide accession

PQ118624.1 [NCBI]

CDS location

range 42206 -> 43825
strand +

CDS

ATGGCAGAAAACGAATTGTACGGTCATGATGGAAGAGGTCATTTCAAAGGAGTATCTTTAGTAGAAGTTCCTCAAAATAAATCTTTAATTTTCACGGATATTTTGACAACTGACAGTGCTTTAAATCCTTCCAAACTGTCCAGCTCACAAGAGTATGGTCGAGGATTTTTAATTCAAGCATCAAAAGAAGGAGCTTTATCTCATCTTGGTATAACTCCTGAAATGCTGACGCCTGGAACTCAAGGCCCAGCTGGTCCTAAAGGAGACCCGGGTCCTCAAGGACTTCAAGGTATTCAAGGACCTAAAGGAGACCCAGGAGCTGATGGAGAACCAGGCCCTCAAGGACTTCAAGGACCAGCAGGCCCGCAGGGACCTATTGGCCCAGGAGGAGAAGGAAGTATAGGTCCAAAAGGTGATAAAGGAGACCCAGGTCCTCAAGGACTTCAGGGTATTCAAGGTCCCGCCGGTGAACCTGGTATTCAAGGACCTATTGGCCCTATTGGCCCGGCAGGATTGGTATGGAGAGGACAATGGAACTCAATAGAAAATTATGAAGCTGATATGGCAGTAGGTTACCAAGGAGCTTCATATTTCGCTGTACGAGCCAATACGGGTGTTTCTCCACTGACTTCAGCCGCTGATTGGGCTTTACTTGCTTCAATGGGAGCTACAGGCCCTCAAGGACCCGTAGGTCAAACTGGCCCACAGGGCCCACAGGGAATTCAAGGTCCGCAGGGATTAGATGGCGCTGGGATTGTCTGGAGAGGACAATGGTTTAATGGACAAGTGTATAATAAAAATGACTGCGTGTATGATTTAGGTTCTTCTTATATATGTTCTGGTGGAGGGCACATAGCATCAGAACAAAATAGACCTACTTCTGAAACAAGCATTTTCTGGGATTATGTCGCCAAGAAAGGAGAAGAAGGGCTACAGGGAATTCAAGGACCCACCGGGCAAAGAGGAGCAACAGGACCGGCTGGACCTAAGGGAGATACTGGTATTGCCGGGCCACAAGGTGTTCAAGGAGAGCGAGGCATTCAGGGAATTCAAGGTCCCGCAGGGCCCACAGGATCTCAAGGCCCAGTCGGTCCCAAAGGAGATAAAGGAGAAGATGCAGTTTTTGATGTCGAATCATTAACTCAGTCTCAGTTGCAGACCTTATATAATAAATTATTAGCATTTCATCCAACCCGTTATTGGAGAGATTCTGTTAAATTCCCGTTCCCATACGATACTACTGTTGAGAAAATATTACCTCTTTGGGCATTTAACTTTAAACTTCATTTTAAAATGATCAGCTATTATAGCTTTGAAATACGAGTTTCTAACCAAGGCGGGTCTGGTCGTTACGATATCAAGAAAATGACCGAATACGATGGCGCCGGGCTTGAGTGCTTATCATTCGTAGATAAACTTTTCGCGTCAAATCCGGAAGTGTTTGACGCAGTATCATTTACACAAAGCCGAGAATTTAACCGTTATGAAATATTTGATAGAGCAACACGTAAATGGTATACTCTTTCTTTATATGCAGTCGGAAGTTTGCATCCATCAAGTACAGAAGAGGTTGAGATATTTGTATCTATTGAAGATAAAACTGCTGGCGGCAAGTTTTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)