Phage RBP Database

Genbank accession

YP_010774532.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,65

TF

Evidence RBPdetect2

Probability 0,65

Protein sequence

MAVTISGTLKDGMQNVLPNTELELRAKKTSANVIVESIAHYYTSLQGTYNFPLEVGAYALYINFGAYGPQYIGDITILVDSLNGTLENFLTIPGEEEITPEILQQVLQARLDAQTAAQEAARSALEAAQSAQNAAGLQAPYKDDAAAQAAITAGTIPNGGVVAVVGTDPNAAYTFKFNNNGTLETILDTSGKPKIFPNFLWYLAQLTRIDANAANLLISAGIYNVGGTNAFEIASAAKQIAVFLDKQGLFGVNSGMFNLGTNKFTPLPAESEYAFVFSDDNDAVVFGIGKAGWIELLGMRLYKESVSGNCVVVTDDSGAMAMSLSNSGVATVYDTGSTPEPTPVLDFVERLHIFIYGQSLSNGAYGTPILNTPTYDSLMYNTGVRSRDSGIPTSFVDLKEATWETIASGFSYEFTKKSGGMNGRKLLMNAGGVNGERIQNLRKGTGPYNAALAQFNWAHTQMVTNGYNHSIDYMFWLQGEANMADGMNKLTYQNHLTGLRGELETDTAGYRETGKPLVMLTYQTSSHGYYNGTPENPPEEIARGQLELALTDPNIDCVGPTYYGPHATTSGNVHHSSHGYRWVGLYFQKALRYRMRTGQKWLPLHPTKARLINPRTMLVDFHVPVPPLKFDEENITPLTDGMKGAEIHDNAGRLTVLSVAIVGGTQLKLTTDRDIGEGAFFATAWTPENRGTYDPATNRWPDWFFGPITGVRTNICDSDPEVTDLMGPYGKPYPLHNFCCIHKVEVTA

Physico‐chemical properties

protein length:	748 AA
molecular weight:	81313,49020 Da
isoelectric point:	5,15214
aromaticity:	0,10027
hydropathy:	-0,21096

Domain architecture

YP_010774532.1

1 748 aa

ATT 1–134 · STR 353–600 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR013609
ATT

IPR013609 IPR036514

SSF52266
STR

SSF52266

YP_010774532.1

1748 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0547
STR

DC_0547

YP_010774532.1

1748 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR013609	ATT	DC_0732	1	134	InterPro cluster	Lambda-like tail fibre protein, N-terminal	N-terminal	Medium	Text match	183 proteins / 183 hits
IPR036514	STR	IPR036514	353	600	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
SSF52266	STR	SSF52266	355	592	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

YP_010774532.1

1 748 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	599	599	0,6513
Central domain	600	737	139	0,7090
C-terminal	738	748	10	0,4834

Note: Constraints were applied during segmentation.
Fixed 184 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Serratia phage vB_SmaS_Opt-155 [NCBI] · taxon 2902690

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

YP_010774532.1 [NCBI]

Genbank nucleotide accession

NC_074758.1 [NCBI]

CDS location

range 18289 -> 20535
strand +

CDS

ATGGCCGTTACTATATCGGGAACCCTCAAAGACGGGATGCAGAATGTTCTTCCCAATACTGAGCTTGAGCTCAGGGCTAAGAAGACATCTGCCAACGTCATCGTGGAGTCCATCGCCCACTATTACACCTCTCTCCAGGGAACGTACAACTTCCCACTCGAGGTTGGTGCTTATGCTCTCTACATCAATTTTGGTGCCTATGGACCCCAATACATCGGGGACATCACCATTCTGGTGGACTCCCTTAATGGAACCCTGGAGAACTTCCTGACTATTCCCGGAGAGGAGGAAATTACTCCGGAGATTCTTCAACAGGTTCTGCAGGCTCGTCTGGACGCTCAAACAGCTGCTCAGGAAGCCGCCCGTTCTGCACTAGAGGCTGCACAATCCGCGCAGAATGCTGCTGGGCTTCAGGCCCCTTATAAGGACGATGCTGCTGCTCAGGCGGCCATAACAGCCGGCACTATCCCCAACGGAGGTGTGGTAGCAGTAGTAGGCACAGACCCCAACGCGGCCTACACTTTCAAATTCAACAACAACGGAACCCTGGAAACCATTCTTGATACCTCTGGGAAGCCAAAGATTTTCCCTAACTTCCTGTGGTACCTGGCTCAACTCACTCGCATAGATGCTAACGCCGCCAACCTCCTGATAAGCGCGGGCATCTATAACGTGGGGGGAACTAACGCCTTTGAGATTGCTTCGGCAGCTAAGCAGATTGCGGTATTCCTTGATAAGCAGGGGCTCTTTGGGGTCAACTCGGGGATGTTCAACCTCGGGACCAACAAATTCACCCCGCTGCCGGCTGAGTCTGAGTACGCCTTCGTCTTCTCCGATGACAACGACGCTGTGGTCTTTGGGATAGGTAAGGCCGGATGGATTGAGCTGCTGGGGATGAGACTCTACAAAGAGTCGGTCAGCGGTAACTGTGTGGTTGTAACTGATGACTCCGGGGCCATGGCCATGTCTCTGTCCAACAGCGGTGTGGCTACGGTCTACGACACAGGTTCTACCCCAGAACCAACTCCAGTGCTGGACTTCGTTGAACGTCTCCACATCTTCATCTACGGACAGTCTCTGTCAAATGGGGCTTATGGTACCCCTATCCTCAACACTCCTACCTATGATTCCCTGATGTATAACACTGGGGTAAGGTCTCGGGACTCGGGGATACCCACCAGCTTCGTGGACTTAAAAGAGGCCACCTGGGAGACTATCGCCTCGGGGTTCTCCTACGAGTTCACTAAGAAGAGCGGGGGCATGAACGGCAGGAAGCTCCTGATGAATGCCGGAGGGGTGAACGGGGAGAGAATTCAAAACCTGAGGAAAGGGACGGGGCCATACAATGCTGCGTTAGCCCAATTCAACTGGGCTCACACCCAGATGGTGACCAACGGGTATAATCACAGCATTGACTATATGTTCTGGCTTCAGGGTGAAGCCAACATGGCCGACGGGATGAACAAGCTCACCTACCAAAACCATCTTACCGGCCTGAGGGGGGAGCTGGAGACCGACACGGCTGGATACCGTGAGACGGGTAAGCCTCTTGTGATGTTGACCTACCAGACCTCCTCACACGGGTACTATAATGGTACTCCAGAAAATCCCCCAGAGGAGATTGCACGTGGGCAATTGGAGCTTGCCCTGACCGACCCGAACATTGACTGTGTGGGTCCTACCTACTATGGTCCCCACGCTACTACGTCTGGGAACGTCCACCACTCCTCCCACGGCTATCGATGGGTGGGGCTGTACTTCCAGAAGGCTCTCCGTTATCGCATGAGGACCGGCCAGAAGTGGCTCCCCCTCCACCCAACTAAGGCTCGGCTAATCAACCCGAGAACCATGCTGGTGGACTTTCATGTTCCAGTTCCTCCGTTGAAGTTTGATGAGGAAAACATCACCCCCCTGACGGACGGGATGAAAGGAGCTGAGATTCACGATAATGCGGGAAGACTAACCGTACTCAGTGTGGCCATCGTGGGTGGAACTCAGCTTAAGCTAACCACTGACCGGGATATTGGCGAAGGAGCCTTCTTTGCTACAGCCTGGACTCCAGAGAATCGGGGGACCTATGACCCGGCCACTAATCGCTGGCCTGACTGGTTCTTTGGACCAATCACGGGAGTGAGAACTAACATCTGTGACTCAGACCCGGAGGTAACAGACCTCATGGGACCTTACGGGAAACCATACCCATTACACAACTTCTGTTGTATCCATAAAGTAGAGGTGACAGCATGA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)