Phage RBP Database

Genbank accession

XLL20042.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,87

TF

Evidence RBPdetect2

Probability 0,69

Protein sequence

MAVITIAGEQLIARKQQAKQPLVIREFVLAHVPNLDPLIPPRRDQSLPTSGLIVFRSAPTRSACVNGNEVVYSLILDNTVGNFQFNWLGLVSEEGVLISANHMVVQSKRKNNERTSEEGNNLTRNFLLKFSGAQAITNITVTPETWQFNYEAKLDDMDTLLAQLTVGLIETQKDVVEQSHENLMLSEANRELGMRLDEMNTVAMIRERRYGELRLEMNRTHRLSEHRRFDMDVSLSTALLKSQQNTVEQMQILMKLNEKIRVMEK

Physico‐chemical properties

protein length:	265 AA
molecular weight:	30276,41910 Da
isoelectric point:	6,25390
aromaticity:	0,04906
hydropathy:	-0,34151

Domain architecture

XLL20042.1

1 265 aa

ATT 2–150 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR022225
ATT

IPR022225

XLL20042.1

1265 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1288
RBD

DC_1288

XLL20042.1

1265 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR022225	ATT	DC_0271	2	150	InterPro cluster	Phage tail fibre protein, N-terminal domain	Central	Medium	Text match	271 proteins / 271 hits

Proteins with similar domain architecture

Phage

Vibrio phage 10N.261.55.B9_PE003 [NCBI] · taxon 3385307

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Vibrio cyclitrophicus [NCBI] · taxon 47951

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

XLL20042.1 [NCBI]

Genbank nucleotide accession

PQ189327.1 [NCBI]

CDS location

range 7601 -> 8398
strand -

CDS

ATGGCAGTCATTACCATTGCAGGCGAGCAGCTTATTGCTCGAAAACAACAAGCAAAACAACCCTTGGTGATCCGTGAGTTTGTGCTGGCGCATGTGCCTAACTTAGACCCACTGATACCGCCACGAAGAGACCAATCACTACCGACGAGTGGCCTGATTGTGTTTCGCAGTGCACCGACTCGCAGCGCTTGTGTAAATGGCAATGAGGTCGTCTATTCGCTGATTTTAGATAACACGGTGGGCAACTTTCAATTCAATTGGCTCGGTCTGGTCAGCGAAGAAGGGGTGTTGATATCAGCCAATCACATGGTGGTGCAATCGAAGCGTAAGAACAACGAACGAACCAGTGAAGAAGGCAACAACTTAACGCGCAACTTCTTGCTGAAGTTCTCCGGCGCTCAGGCCATCACCAATATTACAGTGACGCCAGAGACGTGGCAGTTTAACTACGAAGCCAAACTCGATGACATGGACACTTTACTCGCCCAGCTGACTGTCGGGCTCATTGAGACCCAAAAGGATGTTGTTGAGCAAAGTCATGAAAACTTGATGTTGTCAGAAGCCAACCGTGAATTAGGAATGCGCTTAGATGAAATGAACACCGTAGCGATGATTCGTGAGCGTCGGTATGGCGAACTGAGACTTGAAATGAATCGGACTCATAGATTATCAGAGCACAGGCGGTTTGATATGGATGTGTCTTTGAGCACGGCGTTGCTGAAGTCGCAACAGAATACGGTTGAACAAATGCAAATACTGATGAAGCTGAACGAAAAAATCAGAGTAATGGAGAAATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)