Protein

View in Explore
Genbank accession
AGH57309.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence Phold
Probability 1,00
Protein sequence
MGRLNVTNIAGLDTSVTVEGVTVPQFNVHVNDPLRVDGTLQMESGAKTLNIPNAPVNQRPLKGTRVGSLFYNETENRVEAWDGTNWVASGTGASSTSTLGLPSNPAPSGQHLNYAGFETGYYYIQPNNESSAYRMYVDNRRYAGGWVCAVVVRIEDCQSHVTNNQYGTFTRTDGYLQGPIYDAQVTIKMADSFIQNLRNSSLYRGQTPYWLESGHWTGNYGPINQFFPYAMTIDLANSASNQNARTNIALQYEGQFNDRNPNTGTHGMGDHHTGGTTYFAYGRHPEQGTNCGLRQDTLGQANGWFWVK
Physico‐chemical
properties
protein length:308 AA
molecular weight: 34049,98100 Da
isoelectric point:6,04525
aromaticity:0,11364
hydropathy:-0,60682

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-SSM2
[NCBI] 		536464 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH57309.1 [NCBI]
Genbank nucleotide accession
JF974292 [NCBI]
CDS location
range 35719 -> 36645
strand -
CDS
ATGGGTCGCCTAAATGTAACAAATATAGCAGGACTTGATACTTCTGTAACAGTTGAAGGCGTTACCGTACCCCAGTTCAATGTACATGTAAATGATCCATTGCGTGTTGATGGAACATTACAAATGGAATCTGGAGCGAAGACTCTAAATATTCCTAACGCACCTGTAAATCAAAGACCACTCAAAGGTACAAGAGTTGGTTCGTTATTTTATAATGAAACTGAGAACAGAGTTGAGGCATGGGATGGCACTAATTGGGTAGCATCTGGAACTGGTGCTAGTTCTACATCAACATTAGGACTTCCCTCTAATCCTGCTCCTAGCGGACAGCATCTAAATTATGCTGGATTTGAGACTGGGTATTACTATATTCAACCTAATAACGAAAGTTCAGCATACAGAATGTACGTTGACAATCGTAGATATGCTGGCGGTTGGGTCTGTGCTGTTGTTGTTAGAATAGAAGATTGTCAATCTCATGTAACTAACAATCAGTATGGTACATTCACTAGAACTGATGGATATCTACAGGGTCCAATCTATGATGCTCAGGTTACCATCAAGATGGCAGATAGTTTTATTCAAAACCTGAGGAATAGTAGTCTATATAGAGGGCAGACACCATATTGGTTGGAGTCTGGTCATTGGACTGGTAACTATGGTCCTATCAATCAGTTCTTTCCATATGCTATGACTATTGATCTAGCCAATAGTGCAAGTAATCAAAATGCTCGTACAAACATTGCCTTGCAATATGAAGGACAATTCAACGATAGAAACCCAAACACGGGTACTCACGGTATGGGAGATCACCATACAGGTGGGACTACTTATTTCGCTTACGGCAGGCATCCTGAGCAAGGAACGAACTGTGGACTAAGACAGGATACTTTAGGTCAAGCAAACGGATGGTTCTGGGTAAAATAA

Tertiary structure

PDB ID
af6aa22842beb3a79516de54bf21a5993f016ee429fb108c05fa4fc0d2b503d4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5243
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage S-SSM2 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank