Phage RBP Database

Genbank accession

YP_011859818.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,64

TF

Evidence RBPdetect2

Probability 0,63

Protein sequence

MSRQLMPKSGAMAPYVVVNRDAAVAGVFSVDEEAGAVVLTSKYLQISKYTTDKAATDASINSINESIGNINTALGGINTTLSTKAAKGANNDITELNALTKAITIAQGGTGAKTLENARSNLQVERLRQQDNGTFVTSPDGKYSLFIYNSGDFGLIDSASAAVSAMKVAFGGTGGTTPKTARKSLNTPVGALAEIVPDGDNVLNYVAVAGQSGYYSSGELVVNGPPKQEGWWTYNFHCHGVDINGAAQYGVLHAVGLSGSSWVNVLDGTGNWRGWQEQFNAQTTVQFSNGGTGATSKDGARNNLSIDRFKQSATETMMYAPGVGYRITARPNGEWGNWRDDTGTWIPLAITAGGTGANDASQARKNLGLTEWFVLTSIDQAYPNGFNFDTISVNCKYTIPPSSGSNIVGTRPFQQISHWEDAWFFLETLIHNDSRYRMQRATLFTGAWKNSVAVRTMDNNTWSPWIPVKDAFGSRGNTVGNRVTFLSVGTVSGDAAGLIGGSVESGSWDLWRQRACGLLVEMPARDSAVNVWKSVMWGQDWQGGMDCVLWSAGGGQTNLRVLGAEFRFMSDGSAAAGNWVSTSDIRMKANLQKIETAREKVKSLVGYTYHKRSSLKEDKYSTYNIEAGVIAQDVQLVLPEAVYRIEPQKEDSMLGVSHAGVNALLVNAFNELNEVVEKQQQEIDELKELVKQLLNK

Physico‐chemical properties

protein length:	696 AA
molecular weight:	75109,03450 Da
isoelectric point:	5,93919
aromaticity:	0,08908
hydropathy:	-0,29052

Domain architecture

YP_011859818.1

1 696 aa

STR 420–468 · CHP 583–683 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil cd19958 IPR030392 Coil

IPR030392
CHP

IPR030392

YP_011859818.1

1696 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1346
ATT

DC_1346

DC_0246
RBD

DC_0246

YP_011859818.1

1696 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	112	132	Coils	Coil	-	-	-	-
cd19958	STR	DC_0464	420	468	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
IPR030392	CHP	DC_0088	583	643	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	583	683	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	662	696	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Salmonella phage STWB21 [NCBI] · taxon 2815768

Uroviricota Caudoviricetes Demerecviridae Epseptimavirus Epseptimavirus STWB21

Host

Salmonella enterica subsp. enterica serovar Typhi [NCBI] · taxon 90370

Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Salmonella

Genbank protein accession

YP_011859818.1 [NCBI]

Genbank nucleotide accession

NC_103643.1 [NCBI]

CDS location

range 96153 -> 98243
strand +

CDS

ATGTCTAGACAATTAATGCCTAAGTCTGGCGCAATGGCGCCTTACGTTGTAGTTAACAGAGATGCTGCGGTTGCTGGTGTTTTCTCTGTTGATGAGGAAGCTGGTGCTGTTGTACTGACTTCTAAATATCTACAAATCTCTAAATATACTACTGATAAAGCTGCTACCGATGCATCTATCAATAGTATTAACGAATCAATTGGTAATATTAACACTGCGTTAGGTGGTATTAATACTACTTTAAGTACTAAGGCTGCAAAAGGTGCTAATAACGATATAACAGAATTAAATGCACTAACAAAAGCTATTACTATTGCTCAAGGCGGTACAGGGGCAAAAACGTTAGAAAATGCTAGAAGTAATTTACAGGTAGAGCGCCTACGACAACAAGATAATGGAACTTTTGTTACTTCTCCAGATGGTAAGTATTCTTTATTTATTTATAACAGTGGAGATTTCGGGCTAATTGATAGTGCTAGTGCTGCTGTTAGCGCAATGAAAGTTGCATTCGGTGGTACTGGCGGAACTACTCCCAAAACAGCTAGAAAAAGCCTTAATACTCCTGTTGGCGCTTTGGCTGAAATAGTACCTGATGGAGATAATGTATTAAACTATGTAGCTGTTGCTGGCCAGAGTGGTTACTATTCTTCTGGGGAGCTAGTAGTTAATGGACCACCTAAACAAGAGGGTTGGTGGACATATAATTTTCATTGTCATGGCGTAGATATAAACGGTGCTGCTCAATACGGGGTACTACACGCGGTTGGCTTATCCGGCAGCTCTTGGGTCAATGTTCTAGATGGTACAGGTAACTGGAGAGGCTGGCAAGAACAGTTTAATGCTCAAACTACTGTTCAATTTTCTAATGGAGGTACTGGAGCAACTTCTAAAGATGGTGCTAGAAATAACCTAAGTATTGATAGATTCAAGCAATCCGCCACAGAAACTATGATGTATGCTCCTGGAGTTGGGTACAGAATCACTGCAAGACCTAATGGAGAATGGGGTAATTGGAGAGATGATACTGGTACTTGGATTCCATTAGCTATCACAGCAGGAGGTACTGGAGCTAATGATGCTTCTCAAGCAAGAAAAAATCTTGGATTAACAGAATGGTTTGTATTGACTTCCATTGACCAAGCCTACCCAAATGGGTTTAATTTTGATACTATTAGCGTAAACTGTAAATATACCATTCCTCCTTCCTCTGGATCTAATATTGTAGGTACTAGACCTTTCCAGCAAATCTCTCATTGGGAAGATGCGTGGTTTTTCTTAGAGACTCTAATACATAATGATTCTAGATACAGAATGCAACGCGCCACTTTATTTACTGGAGCTTGGAAGAACTCTGTAGCAGTACGTACTATGGATAATAATACCTGGAGTCCTTGGATACCTGTTAAGGATGCCTTTGGGTCCCGAGGTAATACTGTAGGTAATAGGGTTACTTTTCTGTCAGTAGGTACGGTATCTGGAGATGCTGCTGGTCTGATAGGGGGTTCAGTAGAATCAGGTAGTTGGGATCTGTGGAGACAAAGAGCTTGTGGTTTACTAGTTGAAATGCCTGCTAGAGATTCCGCGGTAAACGTGTGGAAATCGGTCATGTGGGGGCAGGATTGGCAAGGAGGAATGGACTGTGTTTTATGGAGTGCTGGTGGTGGACAAACCAACTTAAGAGTACTAGGAGCTGAATTCCGCTTTATGAGTGATGGAAGTGCAGCAGCAGGCAACTGGGTTAGTACTTCTGATATTCGTATGAAAGCTAATCTACAGAAGATTGAGACAGCCCGAGAAAAGGTTAAATCTCTAGTAGGATACACATACCATAAAAGAAGTAGTCTTAAAGAAGATAAGTATTCCACGTATAATATTGAGGCTGGTGTTATAGCTCAAGATGTGCAATTAGTTCTTCCAGAAGCAGTGTATAGGATAGAACCACAGAAAGAAGATAGTATGCTTGGTGTATCTCATGCGGGTGTAAACGCTTTGTTAGTTAATGCTTTTAACGAGCTTAACGAGGTGGTTGAGAAGCAGCAGCAGGAAATTGATGAACTCAAGGAATTAGTAAAACAATTACTTAACAAGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)