Phage RBP Database

Genbank accession

WJN64324.1 [GenBank]

Protein name

putative tail fiber protein

RBP type

TF

Evidence RBPdetect

Probability 0,90

TF

Evidence RBPdetect2

Probability 0,59

Protein sequence

MLRPKLGRIWADNSSVARRDPGDTKYLTGWLSEIPTYQVLNFLQWKNDLVIQSLAERGVLEWGGDVTYKKGAAVWDETNNKIYIALLDNPDKTKAPSTNLNQWTGSAIQLSRSAYDATVKKIDDHVADVTGNPHKLTPGRLGTYTVAQIDALVAQYRAEVQTHANRKDNPHDVTATQIGAVPVTGGTYTGDVTMGTGQLFLSADKTRLIKSDSTGVYMKNAAGAIGIDAAGKGFVKTGSEAASEIVTKSTFADNKATVEPNYAIPQPVFYLPLASDLNIYIGGGTTLSTQNDTAINWNPQIFNGAYFGTSAGNNPQYDSKITYTYKPLEGLKDMTVCVDIYLDSVGSDSLWDLYASAGSATGCGVIQVNKDNTVWFWSEAGSTPTVSVQNNSWHRVVGVRTASSLILYLDGVRVATAAVTNGPITGDAYNFIRGNVQSTANQRYIKVKNFKLWVGALTDNQVSTL

Physico‐chemical properties

protein length:	465 AA
molecular weight:	50295,70070 Da
isoelectric point:	6,53440
aromaticity:	0,09247
hydropathy:	-0,26215

Domain architecture

WJN64324.1

1 465 aa

STR 278–465

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

G3DSA:2.60.120.200
STR

G3DSA:2.60.120.200

IPR013320
STR

IPR013320

PF13385
LEC

PF13385

WJN64324.1

1465 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0782
STR

DC_0782

WJN64324.1

1465 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.60.120.200	STR	G3DSA:2.60.120.200	278	465	Merged direct domain	G3DSA:2.60.120.200	Central	Low	Positional only	153 proteins / 153 hits
IPR013320	STR	IPR013320	320	464	Merged direct domain	Concanavalin A-like lectin/glucanase domain superfamily	Central	Low	Positional only	237 proteins / 237 hits
PF13385	LEC	DC_0004	321	463	InterPro cluster	PF13385	C-terminal	Medium	Text match	334 proteins / 417 hits

Proteins with similar domain architecture

Phage

Erwinia phage Orgeat [NCBI] · taxon 3056600

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Erwinia amylovora [NCBI] · taxon 552

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

WJN64324.1 [NCBI]

Genbank nucleotide accession

OQ818702 [NCBI]

CDS location

range 38190 -> 39587
strand +

CDS

ATGCTCCGTCCAAAACTTGGGCGCATTTGGGCTGATAACTCAAGTGTTGCTCGTCGCGACCCAGGCGACACAAAATATCTCACTGGCTGGTTGTCTGAGATTCCCACTTATCAGGTTCTCAACTTCCTCCAGTGGAAGAATGATTTAGTCATTCAGTCATTGGCTGAACGTGGTGTTCTGGAATGGGGCGGTGATGTAACCTACAAGAAGGGTGCAGCGGTTTGGGATGAAACCAACAATAAAATTTATATTGCGTTGTTGGATAATCCTGATAAAACCAAAGCCCCTTCCACCAACCTAAACCAATGGACTGGCTCAGCAATCCAACTTTCTCGTTCGGCATATGATGCCACGGTTAAGAAGATTGATGACCACGTTGCAGATGTAACTGGTAATCCACACAAACTTACTCCGGGACGTTTGGGAACTTACACAGTTGCACAGATTGATGCTCTGGTTGCTCAGTATCGTGCTGAAGTTCAAACACATGCCAATCGCAAAGATAACCCTCATGATGTAACTGCAACACAGATTGGTGCTGTTCCTGTTACTGGTGGTACTTACACTGGCGATGTTACAATGGGCACCGGTCAACTCTTCCTGTCTGCTGATAAGACTCGTTTAATCAAGTCCGATTCAACCGGCGTGTACATGAAGAATGCTGCTGGTGCTATTGGTATTGATGCTGCTGGTAAAGGCTTTGTAAAGACTGGCTCTGAAGCCGCATCTGAGATTGTAACAAAGTCCACTTTTGCGGACAATAAAGCAACTGTGGAGCCAAACTACGCCATTCCTCAACCAGTGTTCTATTTGCCGCTTGCGTCAGATTTGAATATTTATATTGGTGGTGGTACAACACTGTCTACTCAAAACGATACGGCAATAAACTGGAATCCTCAGATTTTTAATGGCGCGTATTTTGGCACAAGTGCTGGAAACAATCCACAATACGACAGTAAAATAACCTACACATACAAACCACTTGAAGGTCTTAAAGACATGACGGTTTGTGTTGATATTTATCTCGACAGTGTTGGTTCTGACAGTTTGTGGGATTTGTATGCCTCTGCTGGCTCGGCAACTGGTTGTGGTGTTATCCAAGTAAATAAAGACAATACCGTCTGGTTCTGGTCTGAGGCTGGTTCAACCCCAACTGTATCTGTTCAAAACAATTCATGGCACAGAGTTGTTGGGGTAAGAACTGCATCCTCTTTGATTCTGTATTTAGATGGTGTTCGGGTTGCTACTGCCGCTGTAACTAATGGGCCAATCACCGGTGATGCATACAACTTCATCCGTGGTAATGTACAATCTACCGCAAATCAAAGATACATTAAAGTTAAGAACTTTAAGTTGTGGGTTGGTGCCTTAACAGATAATCAAGTTTCAACATTGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)