Phage RBP Database

Genbank accession

YP_009811771.1 [GenBank]

Protein name

tail tubular protein B

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MKVANSYASLLGGVSQQVPSARFEGQHTEQVNMLSDPVAGLSRRHGSVMQAESLTTYPAGQFAAYMADTASWRTLDFDTSGKKYALLFRTKAAPATANPLPPVLCYNKTDKVWMNTVRNVTDVTLDTFASGGASGAAQVGKYVFMAGNDVVTTGTQTLAWDSAANHNKAVVWIRSGAYSRTFTVKVRLQSGQLITASYTTPSSSFQGTLNTSDILASDPEYTKKVNDRVNAYNSAVTAWIGSSSAAVQPSAIAASLGPLLITAFAGIGIISTPLNVVGSTICFTPNGNVRSVEVDDGGDGSLIRGVADEIESVEKVSVIHYPGKVVKVRSRNAAEAYYLKAIAKDKSALPGLAQEVTWIEGAGVENTITGGLIYGTPGGSNFYIASSASLLNAIIPGDHPTFEISTAGDNDSAPRPFFIGRKITYIGTFQSRLLLGSGGVLCVSRSDDYLNFFRTTVLTAPADDAFEMLAQGSEDDVLRYGTMYDQNLVIFGTKRQYIIDGRSPLTPTSANMPVMSNYEDVSDAPPVGAGGYIMYAKANESATGIHQIQPGQTQNSPESYAASSQLSTYIQGSMVEALSSTGSPSHLIVRTDASRNAVYLFSYLDRQDGRKMDSWSKLTFNSVLGGIVGASVVPSGTMLYFLRQANDSVYLVADFVSLRAGLSNNPYLDSQRPYTASGAILPTAGSAYSVAYNNTSSKYLLGVSLPDRAEVTGDTAGLVVGANQEAYFVPTNPCMRDNKNKAILSGSLTITKFIVATAQSGGFSWSVMSEGTERSKGSFNGLVLGDPDTKVGVAPVVDAQVSVPVGLESRAFAVTITARKWQPLTITAIEWSGQFFNRVQRF

Physico‐chemical properties

protein length:	842 AA
molecular weight:	89500,48490 Da
isoelectric point:	6,23878
aromaticity:	0,09026
hydropathy:	-0,06045

Domain architecture

YP_009811771.1

1 842 aa

TTP 3–841 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR058003
TTP

IPR058003

YP_009811771.1

1842 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0058
STR

DC_0058

YP_009811771.1

1842 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR058003	TTP	DC_0684	3	841	InterPro cluster	Tail tubular protein gp12	Central	High	Text match	1810 proteins / 1902 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

YP_009811771.1

1 842 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	162	162	0,7717
Central domain	163	361	200	0,3336
C-terminal	362	842	480	0,2048

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Curvibacter phage P26059B [NCBI] · taxon 1983784

Uroviricota Caudoviricetes Autographivirales Kalppathivirus Kalppathivirus P26059B

Host

Curvibacter sp. [NCBI] · taxon 1888168

cellular organisms Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales

Genbank protein accession

YP_009811771.1 [NCBI]

Genbank nucleotide accession

NC_048055 [NCBI]

CDS location

range 12768 -> 15296
strand -

CDS

ATGAAAGTAGCTAACAGTTATGCCAGCTTGCTAGGTGGCGTATCCCAGCAGGTGCCCAGCGCCCGCTTTGAGGGCCAGCACACCGAGCAGGTGAACATGCTGTCAGACCCCGTGGCAGGCCTATCCCGCCGCCACGGGAGCGTCATGCAGGCCGAGTCCTTGACTACCTACCCTGCCGGTCAATTCGCGGCCTATATGGCCGATACGGCCTCTTGGCGCACCCTAGACTTCGACACGTCTGGGAAGAAGTACGCCCTACTATTCCGCACCAAAGCTGCCCCGGCAACCGCCAACCCTTTGCCGCCTGTCCTCTGCTACAACAAGACGGACAAGGTGTGGATGAACACAGTACGCAATGTCACTGACGTAACCCTAGACACCTTCGCCTCTGGCGGGGCTAGTGGGGCAGCGCAGGTAGGCAAGTATGTCTTCATGGCGGGCAACGACGTTGTGACTACCGGTACACAAACGCTAGCTTGGGATAGCGCGGCCAACCACAACAAGGCCGTGGTGTGGATTCGGAGTGGTGCGTACTCTCGCACATTCACAGTTAAGGTTCGCTTGCAATCAGGCCAGCTTATAACTGCTAGCTACACCACACCTAGCTCTAGCTTCCAAGGTACGCTTAACACTTCGGACATCCTTGCTTCCGACCCAGAGTACACCAAGAAGGTGAACGACCGGGTTAACGCATACAACTCTGCGGTGACTGCGTGGATTGGTTCGTCTTCTGCGGCAGTGCAGCCTAGTGCCATTGCGGCATCTCTCGGCCCATTGCTCATCACAGCCTTTGCAGGCATCGGTATCATCAGTACACCCCTTAATGTGGTGGGTTCTACGATCTGCTTCACACCCAACGGCAACGTCCGGTCGGTTGAGGTAGACGATGGTGGCGACGGTAGCTTGATTCGTGGCGTGGCCGACGAGATTGAAAGCGTCGAGAAGGTCAGCGTAATCCACTATCCCGGTAAGGTGGTAAAGGTCCGCAGCCGCAATGCTGCTGAGGCCTACTACCTTAAGGCCATTGCTAAGGACAAGTCTGCCCTACCAGGGCTGGCCCAAGAGGTCACGTGGATTGAGGGCGCGGGCGTAGAGAATACCATCACAGGTGGCTTGATCTACGGTACGCCCGGCGGCAGCAACTTCTACATCGCATCCTCGGCTAGCTTGCTTAATGCAATCATCCCCGGGGACCACCCCACATTTGAGATCAGCACAGCAGGAGATAACGACAGTGCGCCACGACCATTCTTCATCGGCCGTAAGATTACCTACATCGGAACTTTCCAAAGTCGCTTGCTACTTGGTAGCGGTGGCGTGCTCTGCGTTAGCCGCAGTGACGATTACCTTAACTTCTTCCGCACCACCGTACTAACAGCACCGGCAGACGACGCCTTTGAGATGCTGGCCCAAGGTAGTGAGGACGACGTTCTCCGCTACGGTACAATGTACGATCAGAACCTTGTGATCTTTGGCACCAAGCGCCAGTACATCATTGATGGGCGCAGCCCGTTAACACCCACCTCGGCTAACATGCCCGTCATGTCTAACTACGAGGACGTGAGCGACGCCCCTCCCGTTGGGGCAGGGGGTTACATCATGTACGCCAAGGCTAACGAGAGCGCTACGGGCATCCACCAGATTCAACCCGGCCAGACTCAGAATAGTCCAGAGAGCTACGCAGCATCAAGCCAGCTTAGCACATACATTCAGGGCTCAATGGTCGAGGCCTTGTCTAGCACAGGTAGCCCAAGCCACCTGATTGTGCGCACTGATGCTAGCCGCAATGCGGTCTACCTGTTCAGCTACCTAGACCGCCAAGACGGGCGTAAGATGGATAGCTGGAGCAAGCTCACATTCAACAGTGTGCTTGGCGGGATTGTTGGTGCAAGCGTCGTGCCCTCGGGCACCATGCTGTACTTCCTCCGCCAAGCCAACGATAGCGTGTACCTAGTGGCAGACTTTGTGAGCTTGCGGGCAGGGTTGTCTAACAACCCCTACCTCGATAGCCAGCGACCCTACACGGCCAGTGGTGCTATCCTACCTACAGCAGGCAGCGCGTACTCTGTAGCCTACAACAACACATCGAGCAAGTACCTCTTGGGGGTTAGCTTACCCGACCGTGCTGAGGTAACCGGCGACACAGCAGGGCTGGTAGTGGGTGCTAACCAAGAAGCATACTTTGTTCCGACCAATCCCTGCATGCGGGATAACAAGAACAAGGCCATCTTGAGCGGCAGTCTGACCATTACCAAGTTCATTGTGGCTACGGCCCAGTCCGGTGGATTCTCTTGGTCTGTAATGTCCGAGGGTACTGAGCGCTCTAAGGGCAGCTTCAACGGCTTGGTGCTAGGCGACCCTGATACCAAGGTAGGCGTAGCCCCCGTGGTAGACGCACAAGTCTCTGTGCCGGTAGGTTTAGAGTCCCGGGCCTTTGCCGTAACCATTACAGCCCGTAAGTGGCAACCCCTGACCATCACCGCTATTGAGTGGAGTGGGCAGTTCTTCAACCGCGTCCAACGCTTTTAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)