Protein

View in Explore
Genbank accession
CAB4139230.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MAYSYVRYSGNGSTTNYTFSFPTISQDHIKVRVNGSLVTNWSFLSASTIQFAVAPANAAVIEIRRETPKESAIVNFTDGSVLLERDLDLLATWQLYVAQETEDDLEDTIKTDSLGRFDANNKRIINVADPVNAQDAVTKTWAETGMSSQLAQATSQATAAAGSATAAAGSASAAATSASNASTSASNAATSASGASTSATAAAGSATAAANSATAAGTSATNANTSALAAAASATAAAGSATTATTQATNAAASAVNAANSAAAAATALDNFDDRYLGQKASDPSVDNDGNALITGALYYNTTDSAMRVYTGTGWINASSAQVATMKTYVYVATAAQTTFTGNDTNGSSLTYVAPYLIVSLNGLELRPVVDYTATSGLSVVLTSAATAGDELQIQAFAGFNVANIQSANVSFQQSGAGSTVRSIDAKLKEIVSVKDFGAVGDGVTDDTAAIQAAINQGGKICLIDNATHKVSAVLNIDISLTSLIGNGSVIDGSSSSTGVLNVYSSASYGAQRLERNWTHWIEGVSFKGTKTPGFQLVTVGHPTYLNNSEITFRNCSFRNAGRLVQFISNAWRVNFDHCGFESPEDNYLHFDSGANAAEVMRFTHCWFVDGTTAYIFLREGQWFFTHCSFIGGGTGGIQVLGSAHVVLRDCNLECQPDVANQRVLEGYNSSHIVVDGCIFGNNGSAANQAPFLIQDSCSLKVINSTLPLYGTDLRGETGGDLRRALVAGGSPYVSCQNNYVKGTGIPGRTDWAVFSHLNNILANGGGETASTTGWSPSAYGTAGSTFTSVTTAPRIGSRHFLVDCVANGGIAVTQTISGASQYIGRTAVFGMWAKAIGGSGAVDFPTIKCLNTSGVVISSFAIPVNATDTSYTWVGGFLVVPSGTDRIQFEIGGQQQAGAHQLHYDDIIVNVI
Physico‐chemical
properties
protein length:913 AA
molecular weight: 94545,21240 Da
isoelectric point:5,01845
aromaticity:0,08324
hydropathy:0,02421

Domains

View on InterPro
Domain architecture
CAB4139230.1
1 913 aa
ATT 2–119 · STR 399–910 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
CAB4139230.1
1 913 aa
Domain Start End Length (AA) Confidence
N-terminal 1 163 163 0,9936
Central domain 164 758 596 0,6697
C-terminal 759 913 154 0,9930
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
uncultured Caudovirales phage [NCBI] · taxon 2100421
Uroviricota Caudoviricetes Peduoviridae Maltschvirus maltsch
Host No host information

Coding sequence (CDS)

Genbank protein accession
CAB4139230.1 [NCBI]
Genbank nucleotide accession
LR796364 [NCBI]
CDS location
range 37063 -> 39804
strand +
CDS
GTGGCGTATTCTTACGTTCGGTATTCCGGTAACGGCTCTACCACCAACTATACCTTTTCGTTTCCTACCATTTCTCAGGACCACATCAAGGTCCGTGTGAACGGTTCTCTGGTGACCAACTGGTCGTTCCTGAGTGCCAGCACGATTCAGTTTGCTGTTGCCCCTGCCAATGCGGCTGTCATCGAGATCCGCCGTGAGACCCCTAAAGAGTCAGCCATCGTGAACTTCACCGATGGGTCCGTTCTGCTGGAGAGGGATCTCGACCTGTTGGCGACCTGGCAGTTGTATGTTGCACAGGAGACCGAGGACGATCTTGAGGACACCATCAAGACGGACTCTCTGGGTCGCTTCGATGCCAACAACAAGCGCATCATCAATGTCGCTGATCCGGTCAATGCCCAGGATGCTGTGACCAAGACCTGGGCTGAGACAGGCATGTCCTCTCAGTTGGCTCAGGCTACCTCTCAGGCGACTGCGGCTGCAGGTTCTGCTACGGCTGCTGCTGGTTCTGCCAGTGCTGCTGCCACATCTGCGAGTAACGCCAGCACTTCGGCAAGCAATGCTGCAACGTCTGCCTCAGGTGCCTCAACCTCTGCCACAGCGGCTGCAGGTTCGGCCACGGCTGCTGCAAATTCCGCAACGGCTGCAGGCACTTCGGCCACCAACGCCAACACCTCTGCCCTAGCTGCGGCAGCTAGTGCAACTGCTGCCGCTGGTTCTGCCACTACGGCGACCACCCAGGCCACCAACGCTGCTGCCTCCGCTGTCAATGCGGCCAACTCTGCGGCTGCTGCTGCTACGGCTCTGGACAACTTTGATGATCGCTATCTCGGTCAGAAGGCCAGCGACCCTAGCGTGGACAATGATGGCAACGCCCTGATTACTGGTGCCTTATATTACAACACCACTGACAGTGCCATGCGGGTTTACACAGGCACGGGCTGGATCAACGCCTCGTCTGCCCAAGTTGCCACTATGAAGACATACGTCTATGTGGCCACGGCTGCACAGACTACGTTCACAGGCAACGATACCAACGGTTCCTCGCTCACCTATGTTGCGCCCTACCTGATCGTGTCTCTGAACGGTCTGGAGTTGCGTCCTGTGGTTGACTACACGGCGACTTCTGGTCTGTCTGTGGTGCTAACTTCCGCTGCTACCGCTGGTGATGAACTCCAGATCCAGGCGTTTGCAGGCTTTAACGTAGCGAATATTCAGTCGGCCAACGTAAGTTTTCAACAAAGCGGTGCGGGTTCTACCGTTCGCAGCATTGATGCAAAATTAAAGGAAATTGTTAGTGTCAAGGACTTTGGGGCTGTGGGGGATGGTGTTACTGACGATACTGCGGCCATTCAAGCAGCCATCAATCAAGGCGGGAAAATTTGTTTGATTGACAACGCCACTCACAAAGTAAGTGCGGTTTTAAACATAGACATTTCGCTCACATCGTTGATTGGTAATGGTTCCGTAATTGATGGTTCGTCTAGTTCCACTGGCGTACTTAACGTATACTCCAGCGCGTCTTACGGCGCACAGCGTCTCGAGCGAAACTGGACACACTGGATTGAAGGTGTGTCTTTCAAAGGGACCAAGACGCCTGGCTTTCAGTTAGTTACGGTTGGGCACCCAACTTACCTTAACAACTCTGAAATCACTTTCCGCAACTGCTCGTTCCGAAACGCAGGCAGGTTGGTGCAGTTTATCAGCAACGCTTGGCGCGTAAACTTTGACCATTGCGGGTTTGAGTCTCCAGAGGACAACTATCTGCATTTCGACTCAGGCGCAAACGCTGCCGAGGTTATGCGGTTCACGCATTGCTGGTTCGTGGACGGTACTACTGCTTATATTTTCTTGAGAGAAGGGCAGTGGTTCTTTACTCACTGCTCATTCATCGGAGGAGGCACCGGAGGAATACAGGTTCTAGGTTCGGCTCATGTCGTGCTGCGTGACTGCAATCTTGAATGCCAACCAGACGTGGCAAACCAGCGAGTCCTTGAAGGATACAACTCCTCCCACATCGTTGTTGACGGGTGCATCTTTGGAAACAACGGCAGCGCCGCAAATCAAGCGCCGTTCCTAATCCAAGATTCCTGTTCGCTCAAAGTCATAAATTCGACGCTTCCCTTGTATGGTACCGACCTCCGAGGGGAAACTGGCGGAGATTTGCGCCGGGCGCTTGTTGCCGGGGGATCACCATATGTGTCCTGTCAAAACAACTATGTGAAAGGCACAGGGATACCTGGGAGAACCGATTGGGCTGTGTTCTCACACCTGAACAACATCCTCGCCAATGGTGGTGGTGAGACAGCAAGTACAACTGGCTGGTCCCCAAGCGCGTATGGAACGGCTGGTTCAACTTTCACAAGCGTAACTACAGCACCGAGAATCGGGTCTCGACATTTTCTAGTTGACTGTGTTGCTAATGGGGGGATTGCGGTCACGCAGACAATTTCCGGTGCTTCGCAATATATTGGTAGAACGGCAGTGTTTGGAATGTGGGCAAAAGCAATCGGCGGATCTGGTGCTGTCGATTTCCCAACCATCAAGTGCCTTAACACCTCTGGCGTGGTTATTTCGTCGTTCGCCATTCCCGTGAACGCGACAGACACAAGCTACACCTGGGTCGGTGGCTTCCTTGTTGTGCCTTCTGGAACCGACAGAATTCAGTTTGAAATTGGTGGCCAACAACAAGCTGGCGCACATCAACTTCACTATGACGACATTATTGTCAATGTCATCTAA

Genome Context

Tertiary structure

CAB4139230.1
ColabFold structure
Source ColabFold
pLDDT 34.3
Oligomeric state monomer
Download structure