Protein

View in Explore
Genbank accession
CAB4139230.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAYSYVRYSGNGSTTNYTFSFPTISQDHIKVRVNGSLVTNWSFLSASTIQFAVAPANAAVIEIRRETPKESAIVNFTDGSVLLERDLDLLATWQLYVAQETEDDLEDTIKTDSLGRFDANNKRIINVADPVNAQDAVTKTWAETGMSSQLAQATSQATAAAGSATAAAGSASAAATSASNASTSASNAATSASGASTSATAAAGSATAAANSATAAGTSATNANTSALAAAASATAAAGSATTATTQATNAAASAVNAANSAAAAATALDNFDDRYLGQKASDPSVDNDGNALITGALYYNTTDSAMRVYTGTGWINASSAQVATMKTYVYVATAAQTTFTGNDTNGSSLTYVAPYLIVSLNGLELRPVVDYTATSGLSVVLTSAATAGDELQIQAFAGFNVANIQSANVSFQQSGAGSTVRSIDAKLKEIVSVKDFGAVGDGVTDDTAAIQAAINQGGKICLIDNATHKVSAVLNIDISLTSLIGNGSVIDGSSSSTGVLNVYSSASYGAQRLERNWTHWIEGVSFKGTKTPGFQLVTVGHPTYLNNSEITFRNCSFRNAGRLVQFISNAWRVNFDHCGFESPEDNYLHFDSGANAAEVMRFTHCWFVDGTTAYIFLREGQWFFTHCSFIGGGTGGIQVLGSAHVVLRDCNLECQPDVANQRVLEGYNSSHIVVDGCIFGNNGSAANQAPFLIQDSCSLKVINSTLPLYGTDLRGETGGDLRRALVAGGSPYVSCQNNYVKGTGIPGRTDWAVFSHLNNILANGGGETASTTGWSPSAYGTAGSTFTSVTTAPRIGSRHFLVDCVANGGIAVTQTISGASQYIGRTAVFGMWAKAIGGSGAVDFPTIKCLNTSGVVISSFAIPVNATDTSYTWVGGFLVVPSGTDRIQFEIGGQQQAGAHQLHYDDIIVNVI
Physico‐chemical
properties
protein length:913 AA
molecular weight: 94545,21240 Da
isoelectric point:5,01845
aromaticity:0,08324
hydropathy:0,02421

Domains

Domains [InterPro]
IPR005604
2–119
IPR005604 IPR012334 G3DSA:2.60.120.260
IPR011050
430–759
IPR011050
IPR024535
431–653
IPR024535
CAB4139230.1
1 913
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4139230.1 [NCBI]
Genbank nucleotide accession
LR796364 [NCBI]
CDS location
range 37063 -> 39804
strand +
CDS
GTGGCGTATTCTTACGTTCGGTATTCCGGTAACGGCTCTACCACCAACTATACCTTTTCGTTTCCTACCATTTCTCAGGACCACATCAAGGTCCGTGTGAACGGTTCTCTGGTGACCAACTGGTCGTTCCTGAGTGCCAGCACGATTCAGTTTGCTGTTGCCCCTGCCAATGCGGCTGTCATCGAGATCCGCCGTGAGACCCCTAAAGAGTCAGCCATCGTGAACTTCACCGATGGGTCCGTTCTGCTGGAGAGGGATCTCGACCTGTTGGCGACCTGGCAGTTGTATGTTGCACAGGAGACCGAGGACGATCTTGAGGACACCATCAAGACGGACTCTCTGGGTCGCTTCGATGCCAACAACAAGCGCATCATCAATGTCGCTGATCCGGTCAATGCCCAGGATGCTGTGACCAAGACCTGGGCTGAGACAGGCATGTCCTCTCAGTTGGCTCAGGCTACCTCTCAGGCGACTGCGGCTGCAGGTTCTGCTACGGCTGCTGCTGGTTCTGCCAGTGCTGCTGCCACATCTGCGAGTAACGCCAGCACTTCGGCAAGCAATGCTGCAACGTCTGCCTCAGGTGCCTCAACCTCTGCCACAGCGGCTGCAGGTTCGGCCACGGCTGCTGCAAATTCCGCAACGGCTGCAGGCACTTCGGCCACCAACGCCAACACCTCTGCCCTAGCTGCGGCAGCTAGTGCAACTGCTGCCGCTGGTTCTGCCACTACGGCGACCACCCAGGCCACCAACGCTGCTGCCTCCGCTGTCAATGCGGCCAACTCTGCGGCTGCTGCTGCTACGGCTCTGGACAACTTTGATGATCGCTATCTCGGTCAGAAGGCCAGCGACCCTAGCGTGGACAATGATGGCAACGCCCTGATTACTGGTGCCTTATATTACAACACCACTGACAGTGCCATGCGGGTTTACACAGGCACGGGCTGGATCAACGCCTCGTCTGCCCAAGTTGCCACTATGAAGACATACGTCTATGTGGCCACGGCTGCACAGACTACGTTCACAGGCAACGATACCAACGGTTCCTCGCTCACCTATGTTGCGCCCTACCTGATCGTGTCTCTGAACGGTCTGGAGTTGCGTCCTGTGGTTGACTACACGGCGACTTCTGGTCTGTCTGTGGTGCTAACTTCCGCTGCTACCGCTGGTGATGAACTCCAGATCCAGGCGTTTGCAGGCTTTAACGTAGCGAATATTCAGTCGGCCAACGTAAGTTTTCAACAAAGCGGTGCGGGTTCTACCGTTCGCAGCATTGATGCAAAATTAAAGGAAATTGTTAGTGTCAAGGACTTTGGGGCTGTGGGGGATGGTGTTACTGACGATACTGCGGCCATTCAAGCAGCCATCAATCAAGGCGGGAAAATTTGTTTGATTGACAACGCCACTCACAAAGTAAGTGCGGTTTTAAACATAGACATTTCGCTCACATCGTTGATTGGTAATGGTTCCGTAATTGATGGTTCGTCTAGTTCCACTGGCGTACTTAACGTATACTCCAGCGCGTCTTACGGCGCACAGCGTCTCGAGCGAAACTGGACACACTGGATTGAAGGTGTGTCTTTCAAAGGGACCAAGACGCCTGGCTTTCAGTTAGTTACGGTTGGGCACCCAACTTACCTTAACAACTCTGAAATCACTTTCCGCAACTGCTCGTTCCGAAACGCAGGCAGGTTGGTGCAGTTTATCAGCAACGCTTGGCGCGTAAACTTTGACCATTGCGGGTTTGAGTCTCCAGAGGACAACTATCTGCATTTCGACTCAGGCGCAAACGCTGCCGAGGTTATGCGGTTCACGCATTGCTGGTTCGTGGACGGTACTACTGCTTATATTTTCTTGAGAGAAGGGCAGTGGTTCTTTACTCACTGCTCATTCATCGGAGGAGGCACCGGAGGAATACAGGTTCTAGGTTCGGCTCATGTCGTGCTGCGTGACTGCAATCTTGAATGCCAACCAGACGTGGCAAACCAGCGAGTCCTTGAAGGATACAACTCCTCCCACATCGTTGTTGACGGGTGCATCTTTGGAAACAACGGCAGCGCCGCAAATCAAGCGCCGTTCCTAATCCAAGATTCCTGTTCGCTCAAAGTCATAAATTCGACGCTTCCCTTGTATGGTACCGACCTCCGAGGGGAAACTGGCGGAGATTTGCGCCGGGCGCTTGTTGCCGGGGGATCACCATATGTGTCCTGTCAAAACAACTATGTGAAAGGCACAGGGATACCTGGGAGAACCGATTGGGCTGTGTTCTCACACCTGAACAACATCCTCGCCAATGGTGGTGGTGAGACAGCAAGTACAACTGGCTGGTCCCCAAGCGCGTATGGAACGGCTGGTTCAACTTTCACAAGCGTAACTACAGCACCGAGAATCGGGTCTCGACATTTTCTAGTTGACTGTGTTGCTAATGGGGGGATTGCGGTCACGCAGACAATTTCCGGTGCTTCGCAATATATTGGTAGAACGGCAGTGTTTGGAATGTGGGCAAAAGCAATCGGCGGATCTGGTGCTGTCGATTTCCCAACCATCAAGTGCCTTAACACCTCTGGCGTGGTTATTTCGTCGTTCGCCATTCCCGTGAACGCGACAGACACAAGCTACACCTGGGTCGGTGGCTTCCTTGTTGTGCCTTCTGGAACCGACAGAATTCAGTTTGAAATTGGTGGCCAACAACAAGCTGGCGCACATCAACTTCACTATGACGACATTATTGTCAATGTCATCTAA

Tertiary structure

PDB ID
79946ca80bda13ba26ad25358817d70d754374f2861a8c0be333ae27f82c40ae
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2557
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50