Protein

View in Explore
Genbank accession
CCH63471.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,54
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAFTHKNQKTFYTDYAIKHGMVPTEDTINLFQVRLKKETTDIYNKFQMVNGKAPLEWNQSENYEVNEIVRYNEVDYKCVQECVNKVPSEEPSFWVVTKYQEYTEFPASNYLAKDNQDPYDPSSMQDYEESNTFHPTTVKHVEDRLKHWFDNETVTNADRLDGEHKDYFCSKQEFDDFVRIALTEESVVDSLESDNRRLPLSAYQGKVLKGLIDHINTILTSNDINLDELQEIVNWIKTNRDMIESLGIDSIKGLRDYLNRIDSDLKKRVTYDYWNAEFLNKIKEVDGHLSGVDADTLDGQHAGYFLPASRFTPEEIALLLQKVPGSLGKIDADKLDGLDSKDFLRRSTSDTPTQDNKFSLGSTALRWSNIYAVNFQGTALQAKYADLAEYYEVPESIKSNIKAGHILGIDACGVNLFNPGMKLFGVVSKNPGVILNNECDGVPIALKGRTPVYCKNKPSIGDYIYADSNGLGIASETELDLPLVGICIGSIINYKDFWICEIKI
Physico‐chemical
properties
protein length:504 AA
molecular weight: 57313,62200 Da
isoelectric point:4,86123
aromaticity:0,10317
hydropathy:-0,49028

Domains

Domains [InterPro]
G3DSA:2.10.10.90
34–110
G3DSA:2.10.10.90 G3DSA:2.40.300.10
CCH63471.1
1 504
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CP21
[NCBI] 		2881391 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCH63471.1 [NCBI]
Genbank nucleotide accession
HE815464 [NCBI]
CDS location
range 6029 -> 7543
strand -
CDS
ATGGCTTTTACACACAAAAATCAAAAAACCTTTTATACTGATTATGCTATTAAACACGGTATGGTACCTACTGAAGATACTATAAATCTATTTCAAGTTCGTCTTAAAAAAGAGACAACTGATATCTATAACAAATTTCAAATGGTGAACGGAAAAGCACCACTAGAGTGGAATCAATCCGAGAACTACGAAGTTAATGAAATTGTAAGATATAATGAAGTAGATTATAAATGTGTGCAAGAATGTGTTAATAAAGTTCCTAGTGAGGAACCTAGTTTTTGGGTCGTTACAAAATATCAAGAATATACTGAATTTCCCGCCAGTAATTACCTAGCTAAAGACAATCAAGATCCTTATGATCCTAGTTCAATGCAAGATTATGAAGAATCTAATACTTTTCACCCAACAACCGTTAAACACGTTGAAGATCGTCTAAAACATTGGTTTGATAATGAAACTGTTACAAATGCTGATAGACTTGATGGTGAACACAAAGATTATTTCTGCTCTAAACAAGAGTTTGATGATTTTGTTAGAATAGCATTGACTGAAGAATCTGTCGTTGATAGTTTAGAATCTGATAATCGCAGATTACCATTAAGTGCTTACCAAGGTAAGGTTCTTAAAGGATTAATAGATCATATTAACACAATTTTAACTTCAAATGACATAAACTTAGATGAACTTCAGGAAATTGTTAACTGGATTAAAACAAATAGAGATATGATTGAATCTTTGGGTATTGATTCTATTAAAGGATTAAGAGATTATTTAAATCGCATAGATTCTGATCTGAAAAAAAGAGTTACTTACGATTATTGGAATGCTGAATTTCTCAATAAAATTAAAGAAGTGGATGGGCATTTATCTGGAGTTGATGCTGATACATTAGATGGTCAACACGCAGGTTATTTCTTACCAGCAAGTAGATTTACACCAGAAGAAATTGCTTTATTACTTCAAAAAGTACCAGGATCTTTGGGTAAAATAGATGCTGATAAATTAGATGGATTAGATTCTAAAGATTTCTTGAGACGTTCAACCAGTGATACCCCTACTCAAGATAATAAATTTAGTTTAGGATCTACAGCTTTAAGATGGTCTAATATATATGCTGTTAATTTTCAAGGAACTGCTTTGCAAGCTAAATATGCTGACTTAGCTGAGTATTATGAAGTTCCAGAATCTATTAAATCGAATATAAAAGCAGGTCATATATTAGGCATAGATGCTTGTGGTGTAAATTTATTTAACCCAGGTATGAAATTATTTGGTGTTGTTTCAAAAAATCCTGGTGTAATTCTGAATAATGAATGTGATGGTGTTCCAATTGCATTGAAAGGTAGAACTCCAGTTTATTGCAAAAATAAACCTAGTATAGGTGATTATATCTATGCTGATTCTAATGGGTTGGGTATTGCAAGTGAAACTGAATTAGATTTACCATTAGTGGGTATTTGTATAGGTTCTATAATAAATTATAAAGATTTTTGGATTTGCGAGATCAAAATCTAA

Tertiary structure

PDB ID
5b495dcc7c1d3f30e05c84055cd7670375060d8c410edea3f5e2b5a39c049ee0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6797
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Complete Genome Sequence of Bacteriophage CP21 Reveals Modular Shuffling in Campylobacter Group II Phages Hammerl,J.A., Jackel,C., Reetz,J. and Hertwig,S. 2012 22843857 GenBank