Phage RBP Database

Genbank accession

QZI92616.1 [GenBank]

Protein name

central tail fiber J

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,60

Protein sequence

MPPVIVAVAAGAAAYAAGATVIAAVTIAAAAAALYSVATMDIPSTPGTDPSTAKQTIRTPNQPCRRIFGTAMVGGVLSFAEEYLHKGGHEEEYQSCSWRPGGRDDRGDHTCRTRTRWVDTSTKYLHLVVVLAAHEVEDILEVYFGDELKTDWDHEFWKINVMKGDQTQWEHLPKILRDVPSWTNKMVGKGIAFVHVALKHSAKHFPNGIPSIKCLVKGTKLKTPFFNGFGNNAAACIYHYLRYQFGATEKMINTASFRNEFNVSNEVMGSEPEIGHPRKHPIRYAIDGAFDYDESHQNVLKKMLSACGGNLIFTNGQYYLQVAAYRGPVSSKQVITLDNLNGPLSISPDTPLNDRINIVQGQYLDPDSAYLQADFKPVTNPAYVAEDGGEERPYDADFEYVLNKHQAHRLANIILKDNRYGLTIKAPMNLSGFKFNAGLLVGLDDKSLGYDKLEFRIVNWRLDPKGGVQLTLKQTAADIYDDSTAPVTPKPPSTNIPDSSFCYPVERVTFDTFDDDGVYDGLLWWSHPDLSNVREFEVVAASAGGEILRFNTGKDTEYRLQNMRGVVYNITITAFNLYGAPSNPVTVVTKVGDPKPVTGVVFEPDNFEVVIKPTVSGIIPQNTRFAYFRANTPVPDNKDMTRIGEGVTFTDVGLIPNTAYHYFIQPLNGAAMGDLFGPYGTKTTDNPSDIYDLIKDEIPGTFTWVVYATDAFGAGISKTFDPAKHNFEGRAYNKAVEEPSLNPLDYTFFRIGEFISDAEQTILDNLKLGKTPDGTDDLVGEVAVKTIAAQEVNALKVLADWVKAHNIAAGAITADKIAVTVVAPVNNFTQFGDLRGWTVPSDSNLVDEVLLQSRKVKTLKIISGSVDKAATADKFSVDHNSIYEVRIALYSDQSTAATEQQFSMQSFDAKGSVVYTKAYHASTRRQAGSETTLEFWKGSVSGGLWRHMVVYIVGANADINAMPDCANVTYFAKLTPDVRDVSISAIALGSGNASTVHVYSPSVISVGSGVLSAFVIRAGALITSPKIVGGIVEGGVIKGGRIEGTTGEFEGTVKVGKLVGGVGLTSWGALELGWRMSWSVNGTPYKLIPKVRIRIPKEDFKRKGIITLYLSDVKASRDIRDRTAEGSGQGFNSLKLSASSAISVGGRIVDSNKTPTKVTGASNSLVMQRASGVLDPISLTYGITIDASAPNDKGVHDFYLCIHGDAGTKSLNYAFSIGWNATNATVILDRDNSDIIMSG

Physico‐chemical properties

protein length:	1239 AA
molecular weight:	134719,64470 Da
isoelectric point:	5,99540
aromaticity:	0,09443
hydropathy:	-0,16707

Domain architecture

QZI92616.1

1 1239 aa

ATT 295–460 · STR 504–684 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR032876
ATT

IPR032876 IPR003961

IPR036116
STR

IPR036116

QZI92616.1

11239 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0187
STR

DC_0187 DC_2102

QZI92616.1

11239 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR032876	ATT	DC_0307	295	460	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR003961	STR	DC_0003	504	589	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR036116	STR	IPR036116	523	684	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QZI92616.1

1 1239 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	927	927	0,6881
Central domain	928	1126	200	0,1281
C-terminal	1127	1239	112	0,9973

Note: Constraints were applied during segmentation.
Fixed 298 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Vibrio phage 264E42.1 [NCBI] · taxon 2859320

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Vibrio crassostreae [NCBI] · taxon 246167

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

QZI92616.1 [NCBI]

Genbank nucleotide accession

MW824417.1 [NCBI]

CDS location

range 20501 -> 24220
strand +

CDS

ATGCCACCAGTAATTGTTGCGGTTGCGGCAGGTGCCGCTGCCTACGCTGCGGGTGCTACGGTAATTGCTGCGGTAACTATCGCGGCTGCTGCGGCTGCTCTGTATTCCGTAGCCACCATGGATATCCCTAGCACTCCCGGTACTGACCCATCAACGGCCAAGCAAACCATACGAACACCTAACCAACCCTGTAGGCGGATATTCGGTACGGCCATGGTAGGCGGGGTATTGTCTTTTGCAGAAGAGTACCTACACAAAGGAGGTCATGAAGAAGAGTATCAATCCTGTAGTTGGCGTCCTGGTGGTCGCGACGATCGTGGTGACCACACCTGTAGGACCAGAACCCGTTGGGTAGACACTAGTACCAAGTACTTACACTTGGTCGTTGTTCTAGCGGCACACGAAGTTGAAGACATACTTGAAGTGTACTTTGGTGATGAACTAAAAACAGACTGGGATCACGAGTTCTGGAAAATTAACGTCATGAAAGGCGATCAGACACAGTGGGAACATTTACCGAAAATACTTCGTGATGTGCCGTCTTGGACTAACAAGATGGTAGGCAAGGGTATTGCGTTCGTCCACGTAGCGCTTAAGCACAGTGCAAAACATTTCCCTAACGGCATACCAAGCATCAAGTGTTTGGTAAAAGGTACCAAATTAAAAACACCATTCTTCAACGGTTTTGGTAATAACGCTGCGGCTTGTATTTATCACTACTTGCGCTACCAGTTTGGTGCTACAGAGAAGATGATAAACACGGCATCTTTCAGAAACGAGTTCAATGTTTCTAATGAAGTTATGGGTAGTGAGCCAGAAATAGGTCACCCACGTAAACACCCAATTCGTTACGCTATTGACGGAGCCTTTGATTACGATGAAAGTCACCAGAACGTTCTTAAGAAGATGCTTTCTGCTTGTGGCGGTAACCTAATATTTACCAACGGCCAGTACTACCTTCAGGTTGCTGCTTATCGTGGTCCAGTCTCGTCTAAGCAAGTGATCACGTTAGATAACTTGAATGGACCGTTAAGCATTTCACCAGATACACCACTTAACGACAGAATTAATATCGTTCAAGGTCAGTATTTAGACCCAGATTCCGCGTACCTTCAAGCTGACTTTAAACCGGTAACTAACCCTGCTTACGTTGCTGAAGATGGCGGCGAGGAAAGACCTTACGACGCAGACTTCGAATATGTTCTTAACAAGCATCAAGCACACAGACTGGCTAACATCATCTTAAAAGATAACCGCTACGGGCTGACTATCAAAGCGCCTATGAACCTAAGTGGTTTCAAATTCAATGCAGGCTTGTTGGTTGGTTTAGATGATAAATCGTTAGGCTATGACAAGCTTGAGTTTCGCATTGTTAACTGGCGTCTAGACCCTAAAGGTGGTGTGCAACTTACACTTAAACAAACTGCAGCCGACATCTATGATGACTCGACAGCACCAGTGACGCCTAAGCCGCCTTCTACCAATATCCCAGACTCAAGTTTCTGCTACCCAGTAGAACGGGTAACTTTTGACACGTTCGACGATGATGGCGTTTACGATGGCCTACTTTGGTGGTCTCACCCTGACTTGTCTAACGTTCGTGAGTTCGAAGTGGTTGCTGCTTCTGCAGGCGGTGAGATACTAAGATTCAATACGGGTAAAGACACTGAGTACCGATTACAGAATATGCGCGGTGTGGTTTACAACATCACAATCACAGCATTTAACTTATACGGTGCACCGTCTAATCCGGTCACTGTCGTAACGAAAGTGGGCGATCCTAAACCTGTCACTGGTGTAGTGTTCGAACCAGACAACTTCGAAGTGGTTATTAAGCCTACCGTGTCTGGCATTATTCCACAGAATACACGCTTTGCTTATTTCAGAGCCAACACACCTGTACCAGACAACAAGGATATGACAAGGATTGGCGAAGGTGTGACGTTTACGGACGTTGGGCTTATCCCTAACACGGCTTACCACTATTTCATTCAACCGCTTAATGGCGCTGCCATGGGTGATCTGTTTGGCCCGTATGGTACTAAGACTACGGATAACCCTAGCGACATTTATGATCTGATAAAGGACGAAATACCAGGGACATTCACTTGGGTGGTTTATGCAACTGACGCTTTTGGTGCGGGTATCAGCAAGACGTTTGACCCTGCTAAGCACAACTTCGAAGGTCGCGCATATAACAAGGCAGTCGAAGAGCCTAGCTTAAATCCGTTGGATTACACGTTCTTCCGCATTGGTGAGTTCATTAGCGATGCAGAACAGACGATTCTTGACAACTTGAAGTTGGGTAAAACTCCTGACGGCACTGACGATTTGGTCGGTGAGGTGGCGGTTAAAACCATTGCCGCACAAGAAGTTAATGCGCTTAAAGTTTTAGCGGATTGGGTTAAGGCTCATAACATAGCAGCAGGGGCAATAACAGCCGACAAAATAGCGGTCACTGTGGTAGCACCAGTCAACAACTTCACTCAATTTGGAGACTTGAGAGGTTGGACAGTGCCTTCCGACTCTAACCTGGTTGATGAAGTTCTTTTGCAAAGTAGGAAGGTTAAAACCCTCAAGATCATTAGCGGAAGTGTTGACAAAGCGGCAACTGCCGACAAGTTCTCTGTTGACCACAACTCTATTTACGAAGTTCGTATCGCTCTGTATTCAGACCAATCTACCGCTGCAACTGAACAACAGTTCAGTATGCAGTCATTTGATGCGAAAGGGTCTGTGGTATACACAAAGGCGTACCATGCCTCCACTAGAAGACAGGCAGGAAGCGAGACTACTTTAGAGTTTTGGAAGGGTTCTGTCTCTGGCGGGTTGTGGCGTCATATGGTTGTTTATATTGTAGGAGCTAACGCAGACATTAACGCAATGCCTGACTGTGCCAACGTCACTTACTTTGCCAAGCTTACCCCTGATGTAAGGGATGTAAGCATATCGGCTATAGCGTTAGGTAGTGGAAACGCCAGTACGGTTCACGTCTACTCACCGTCAGTGATATCAGTAGGAAGTGGTGTTCTGTCCGCGTTTGTAATTAGGGCAGGCGCTTTAATAACTTCGCCTAAGATTGTAGGTGGTATAGTAGAAGGTGGTGTGATCAAAGGTGGCCGTATCGAGGGTACGACGGGCGAATTCGAAGGTACTGTTAAAGTTGGTAAGCTTGTCGGTGGTGTTGGTTTGACCAGTTGGGGAGCATTAGAACTTGGTTGGCGTATGAGTTGGTCTGTAAATGGCACCCCATATAAACTCATACCTAAAGTTAGAATTAGAATACCCAAAGAAGACTTTAAAAGAAAAGGGATAATCACTCTATACCTTTCAGACGTAAAAGCCAGTCGTGACATTAGGGACAGAACAGCAGAAGGTTCCGGTCAGGGTTTTAACTCTCTTAAACTCTCTGCCTCTTCGGCTATTAGTGTGGGTGGGCGTATTGTAGATAGTAACAAAACACCAACTAAAGTTACTGGTGCCAGCAACTCATTGGTTATGCAGAGAGCGTCAGGCGTATTAGACCCGATCTCATTAACATACGGAATTACGATAGACGCGTCTGCACCGAATGACAAAGGTGTGCACGACTTTTATTTGTGCATTCACGGTGATGCAGGTACTAAGAGTCTGAACTACGCATTTAGTATTGGTTGGAACGCTACTAACGCCACGGTCATCTTGGACAGGGACAACAGCGATATAATAATGAGTGGTTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)