Phage RBP Database

Genbank accession

QTZ82903.1 [GenBank]

Protein name

tail protein endopeptidase

RBP type

TSP

Evidence DepoScope

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,59

Protein sequence

MIKLYDKTGETLLGNLDEFISCEVTEVRNGIFDAKIVYPAMRLISNDLIKENIIVCKANDTLLNQKFRIFNVRKKHSNTIEVLARHKSFDLLYDFIENINIVNQSCEYALNTIFRNSQFSRHYKGYSDIINAQDYSMSMTNCLNAIAGKQGSIIDTYGTGAEILRDNENIHVLNRRGHDNGVTIEYGKNLEGFECTEDTTDLITRIYPFVKKSTTEGDVTITLNEKFVDSPRINLYSHPYIKDVDLTSKFSEDEEVTQAKLKLEAEKYFIETKCDIPKLTFNIKFVPLSKCVGFEDLDERISLCDIVTIKHKIYGITTQVKVIKTVFDVATDRYKSMELGDPKVSLGDLIGSGDAPQVGPPGPQGPPGQDGSIGDFPDSLPAIPQLTANVLGFASVDLSWTYENKVYYNYQVFASKTENFEPNMFDLIFEGQASSFLHQVKPNETWYYRARAVNTHGKATELSTQVKVVTKKVDDFENYFSSVAIEKLVAGIFSVDYMTAGIIKGHWIDAKNLSVTDGNGKRTLDIDSYGNVDLDVNSLSIRSKKVLNEEELNKNFDINLLKNTLPHNNTEWQALNGSVSFVTSDTELKIHIINTTKQADAILIQENDKNILVDCGYNSTINIVIEYLKNNGVGEIDLFIATHAHTDHVGGIEAICNNFTIKEAIYREADWNIVDQIEPEGWGTSAAHRKMLEVFLAKGIKHREAKIIDVIKISNNGELRLINTTNETYDEYNTRSLGVLYTHYNNKILLASDMTIESEKHCLGEIGKVDVLKVGHHGANGSNSEAYLEEIKPQYGLITTMDIDHIDRKKALGCLQWEGIPMYDTGTNGTFVITSTKDDLSVSNLNTEYKLKNQWWYRRTVNNFEEWVYFKSDGSIARNETVTIGGGLYEFDENGICKEPY

Physico‐chemical properties

protein length:	901 AA
molecular weight:	101703,46990 Da
isoelectric point:	5,16720
aromaticity:	0,09434
hydropathy:	-0,35838

Domain architecture

QTZ82903.1

1 901 aa

ENZ 90–340 · STR 379–478 · STR 585–847 · RBD 848–896 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR007119
Unmapped

IPR007119 IPR036116 IPR052159

IPR010572
ENZ

IPR010572 IPR013783 IPR036866

IPR036866
STR

IPR036866

IPR036866
STR

IPR036866

IPR001279
STR

IPR001279 SSF69360

IPR001279
STR

IPR001279

IPR035681
STR

IPR035681

QTZ82903.1

1901 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1956
STR

DC_1956 DC_1241

QTZ82903.1

1901 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR007119	Unmapped	-	50	340	InterPro	Phage tail spike protein, N-terminal domain	-	-	-	-
IPR010572	ENZ	DC_0675	90	340	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
IPR036116	STR	IPR036116	379	467	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
IPR013783	STR	IPR013783	381	478	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR052159	Unmapped	-	571	844	InterPro	Bacterial competence-related DNA uptake protein	-	-	-	-
IPR036866	STR	IPR036866	585	846	Merged direct domain	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Central	Low	Positional only	4 proteins / 4 hits
IPR036866	STR	IPR036866	586	847	Merged direct domain	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Central	Low	Positional only	4 proteins / 4 hits
IPR036866	STR	IPR036866	590	846	Merged direct domain	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	Central	Low	Positional only	4 proteins / 4 hits
IPR001279	STR	DC_0053	597	796	InterPro cluster	Metallo-beta-lactamase	Central	Low	Positional only	4 proteins / 5 hits
IPR001279	STR	DC_0053	598	801	InterPro cluster	Metallo-beta-lactamase	Central	Low	Positional only	4 proteins / 5 hits
IPR035681	STR	DC_0053	598	777	InterPro cluster	ComA-like, MBL domain	Central	Low	Positional only	4 proteins / 5 hits
SSF69360	RBD	SSF69360	825	896	Merged direct domain	SSF69360	C-terminal	Low	Positional only	4 proteins / 4 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QTZ82903.1

1 901 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	651	651	0,7392
Central domain	652	890	240	0,5791
C-terminal	891	901	10	0,2869

Note: Constraints were applied during segmentation.
Fixed 62 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Clostridium phage phiCp-D [NCBI] · taxon 2814704

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Clostridium perfringens [NCBI] · taxon 1502

cellular organisms Bacteria Bacillati Bacillota Clostridia Eubacteriales

Genbank protein accession

QTZ82903.1 [NCBI]

Genbank nucleotide accession

MW478291 [NCBI]

CDS location

range 14163 -> 16868
strand +

CDS

TTGATAAAGTTATATGATAAGACTGGAGAAACACTTTTAGGAAATTTAGATGAGTTTATTTCATGTGAAGTAACTGAAGTTAGAAATGGTATTTTTGATGCTAAGATAGTATATCCAGCTATGAGATTAATCTCTAATGACTTAATTAAAGAAAATATTATAGTTTGTAAAGCTAATGATACTTTATTAAATCAAAAATTTAGAATTTTTAATGTTAGAAAAAAACATTCAAACACTATAGAAGTTTTAGCTAGGCATAAATCATTCGATTTACTATATGACTTTATAGAAAATATAAATATAGTTAATCAAAGTTGTGAATATGCTCTTAATACTATCTTTAGAAATTCACAGTTTTCTAGGCATTATAAAGGCTACTCAGACATAATTAATGCTCAGGACTATAGTATGTCTATGACTAATTGTTTAAATGCCATAGCTGGGAAACAAGGTTCTATTATAGATACTTATGGAACTGGAGCAGAAATACTAAGAGATAATGAAAATATCCATGTACTTAATAGGCGTGGCCATGATAATGGAGTAACAATTGAATATGGTAAAAATTTAGAAGGATTTGAATGTACAGAAGATACAACAGATCTAATAACTAGAATATACCCTTTTGTTAAAAAGTCAACTACTGAAGGTGATGTTACTATTACTCTTAATGAAAAGTTTGTTGATAGTCCTAGAATAAATCTTTACTCACACCCTTATATAAAAGATGTTGATTTAACTTCTAAATTCTCAGAGGATGAAGAGGTTACTCAAGCTAAATTGAAACTAGAGGCTGAAAAATACTTTATTGAAACTAAATGTGATATACCTAAACTTACTTTTAATATAAAATTTGTTCCACTTTCTAAATGTGTAGGGTTTGAAGATTTAGATGAACGAATTTCTTTATGTGACATAGTTACTATAAAGCATAAAATTTATGGTATAACTACTCAAGTTAAAGTTATTAAAACTGTATTTGATGTAGCGACTGATAGATATAAAAGCATGGAACTAGGTGATCCTAAAGTATCTCTAGGAGATTTGATTGGAAGTGGTGATGCTCCACAAGTTGGACCACCTGGACCACAAGGGCCACCTGGTCAAGATGGAAGTATAGGTGATTTCCCTGATAGCTTACCTGCTATTCCACAATTAACTGCTAATGTACTAGGATTTGCTAGTGTAGATTTATCTTGGACTTATGAGAATAAGGTCTATTATAACTACCAGGTATTTGCTTCTAAAACAGAAAACTTCGAGCCTAACATGTTTGACTTAATTTTTGAAGGTCAAGCAAGTTCATTCTTACATCAAGTTAAACCTAATGAAACTTGGTATTACAGAGCAAGAGCTGTAAACACTCATGGTAAAGCTACAGAATTATCTACTCAAGTAAAGGTAGTTACTAAAAAGGTTGATGACTTTGAAAATTATTTTTCTAGTGTGGCTATAGAAAAACTAGTAGCTGGTATATTCTCGGTTGACTATATGACAGCTGGAATAATTAAAGGTCATTGGATAGATGCAAAGAATCTTAGTGTAACAGATGGAAACGGGAAAAGAACTTTAGACATAGATAGTTATGGGAATGTTGATTTAGATGTTAATAGTTTAAGTATAAGATCAAAAAAGGTTCTAAATGAAGAGGAGCTAAACAAAAATTTTGATATAAATTTATTGAAAAATACGCTTCCGCATAATAATACTGAATGGCAAGCTTTAAATGGTTCAGTATCTTTTGTAACTAGTGATACAGAACTTAAGATTCATATAATAAACACAACTAAACAAGCTGATGCTATATTAATTCAAGAAAATGATAAAAATATTCTGGTTGATTGTGGCTATAATTCTACGATTAATATAGTTATAGAGTATTTAAAAAATAACGGAGTAGGTGAAATTGATTTATTTATAGCTACTCACGCTCATACGGATCACGTGGGAGGTATAGAAGCTATATGTAACAACTTTACTATAAAAGAGGCTATATATAGAGAAGCAGATTGGAATATAGTTGACCAAATAGAACCAGAAGGTTGGGGAACTAGTGCAGCACATAGAAAAATGCTTGAAGTATTTTTAGCTAAAGGTATAAAACATAGAGAAGCTAAAATTATTGATGTAATAAAGATAAGTAATAATGGTGAATTAAGACTAATAAACACTACCAATGAAACTTATGATGAGTATAACACACGAAGTTTAGGTGTTCTCTATACTCATTACAATAATAAGATTCTCCTTGCTAGTGATATGACTATAGAAAGTGAAAAGCACTGTTTAGGAGAGATAGGAAAAGTTGATGTTCTTAAGGTAGGTCATCATGGTGCAAACGGCTCAAACTCTGAAGCTTATTTAGAGGAAATTAAACCACAATATGGTTTAATAACAACTATGGACATAGATCATATAGATAGAAAAAAGGCTCTAGGATGCTTGCAATGGGAAGGGATACCTATGTATGATACTGGAACTAATGGAACTTTTGTTATAACTTCAACTAAAGATGATTTATCAGTATCAAATTTAAATACAGAGTATAAACTTAAAAATCAATGGTGGTATAGAAGGACTGTAAATAATTTTGAGGAGTGGGTTTATTTTAAATCCGATGGAAGTATAGCAAGGAATGAAACTGTAACAATAGGAGGAGGGCTTTATGAGTTTGATGAAAATGGAATCTGTAAAGAACCTTACTAA

Title	Authors	Date	PMID	Source
Isolation and characterization of four temperate phages infecting Clostridium perfringens and evidence of pseudolysogeny involving large plasmid-like prophages	Allen,M.-M., Sbaghdi,T., Garneau,J.R., Duclos,A., Alix-Pare,O., Gaucher,M.-L., Labrie,S.J. and Fortier,L.-C.	1990-11	—	GenBank

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature