Protein

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Genbank accession
YP_004957630.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGSMSKKQNFNNKELNTTSMQAALQCEQLALNEKAQDLQSEQVRAKMQIDFLSMQANLQNAKAETLNKLIQCQAMLKSLKDNAMINRANAFVSLLQVQANAANGITAFNFEAAFKIIAQIGSEYNQITLNYGKVSVQEKEQTNELKTLLNELSKELEKLNEQSEVNSIQVFSDKLEVLKDAPTRLWGFSTLSNATEGFYSADNEQLASGSVFLFRSDRVGKHTITFRASNTKTNLAKNITISVIANKLKERTN
Physico‐chemical
properties
protein length:253 AA
molecular weight: 28242,71850 Da
isoelectric point:8,74135
aromaticity:0,06324
hydropathy:-0,42411

Domains

Domains [InterPro]
Coil
21–41
Coil Coil
YP_004957630.1
1 253
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage phiHP33
[NCBI] 		1069378 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Helicobacter pylori B45
[NCBI] 		999629 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Helicobacteraceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004957630.1 [NCBI]
Genbank nucleotide accession
NC_016568.1 [NCBI]
CDS location
range 20373 -> 21134
strand +
CDS
ATGGGGAGTATGTCAAAGAAGCAAAATTTTAATAACAAAGAACTCAACACCACGAGCATGCAAGCAGCCTTGCAGTGCGAGCAGTTAGCTTTAAATGAAAAAGCGCAAGATTTGCAAAGCGAGCAAGTGAGAGCTAAAATGCAAATAGATTTTTTAAGTATGCAAGCGAATTTGCAAAACGCCAAAGCCGAAACCTTAAACAAACTCATTCAATGCCAAGCGATGCTAAAAAGCCTAAAAGATAACGCCATGATTAACCGAGCCAACGCATTTGTAAGCCTTTTGCAAGTGCAAGCGAATGCGGCTAATGGGATCACAGCGTTCAATTTTGAAGCGGCGTTTAAAATCATTGCTCAGATCGGATCTGAATACAATCAAATCACCTTAAACTATGGGAAAGTGAGCGTGCAAGAAAAAGAACAAACGAACGAACTCAAAACACTATTAAACGAGTTGAGTAAGGAATTAGAAAAACTAAACGAACAGAGCGAGGTTAATTCTATACAGGTTTTTAGCGATAAGTTAGAAGTGTTGAAAGATGCGCCTACTAGGCTATGGGGGTTTAGCACTTTATCTAACGCAACCGAAGGATTTTACAGTGCTGATAACGAGCAATTAGCGAGCGGTAGCGTGTTTTTGTTTAGGAGCGATAGAGTGGGAAAACACACGATCACTTTTAGGGCAAGTAACACTAAAACCAATCTAGCTAAAAATATTACTATTAGCGTGATCGCTAACAAACTCAAAGAAAGGACTAACTAA

Tertiary structure

PDB ID
f953295886d378923dcb32010d5e5b7f880970cad4f749f94a2884dc1034b54f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6849
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50