Protein

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UniProt accession
A0A0N6YQW0 [UniProt]
Protein name
Putative tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
Protein sequence
MNSQFSQPKGSVSKETNKDSIARKFGCKKSEVLYAKAGVSLSGYKVIYDKNTERSYALPSDLPSDSVFISLTNAILTHNGGTVDLGALAVLRGEFVTVGGTFTVGGTLGVKNELLTHDDGKYRWGGTFPKIVPLGSSPEASGGISPTTWIKIYDPSLRENLFSSAGAGVIGSADGNVQNDLSTLKISTTKLNNHADLVIDDYLFSGETTYDNAIQRVLTESLSSGRPIKFLPHVYNFSSPVTLNMDAPGIKIYGAGVSRTELRFPNAAAGVTQLIIKSTADWYDFVWEGMSVRSSHAGILCQIGNTNFVDPLNVARLEDLAFLNSSSIGDNNVVALSLEYGVQCSLINVRANCYATGTGVNVGRALVVRQVGFTTYVSCSFGNASYGVSFLDGVSFTNNFIGCDFENINIALYNGVPTSGGHTFIGCQFSLWTQFLAQAPVGSTNRFLIINPNVSQVDGLVDPNNAVGVKFQNDQLDITTPGLPASGSSVTNTTGRVVVVTIGGGTVSAILRNGGTLGITNGTVILLPMDTITLVYSAGPSWSWYKLG
Physico‐chemical
properties
protein length:548 AA
molecular weight: 58091,77970 Da
isoelectric point:5,90969
aromaticity:0,09124
hydropathy:0,06880

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
1–93
G3DSA:3.30.2020.50 IPR040775
G3DSA:2.10.10.80
94–163
G3DSA:2.10.10.80
A0A0N6YQW0
1 548
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage phiD3
[NCBI] 		1542131 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Tertiary structure

PDB ID
d49676aec1c52ad57da29a42eb774a403f82fc78f218c8e2b20ccc4cc0ec83cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8453
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome, structural proteome, comparative genomics and phylogenetic analysis of a broad host lytic bacteriophage ϕD3 infecting pectinolytic Dickeya spp. Czajkowski R, Ozymko Z, Siwinska J, Ossowicki A, de Jager V, Narajczyk M, Łojkowska E 2015 26405503 PubMed
The complete genome, structural proteome, comparative genomics and phylogenetic analysis of a broad host lytic bacteriophage ϕD3 infecting pectinolytic Dickeya spp. Robert Czajkowski, Zofia Ozymko, Joanna Siwinska, Adam Ossowicki, Victor de Jager, Magdalena Narajczyk, Ewa Łojkowska 2015-09-24 10.1186/s40793-015-0068-z DOI