Protein

View in Explore
Genbank accession
YP_009792408.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,99
Protein sequence
MALVDLVRAGGYSIEYPQFSSMAKLKAFPHSEDGQLVRLLSWHEGVGLGGGLFKVSTSSTATGNDGTVVVASNGVRLLRVVNGPIWADMFGALPNSDIDSMPAVAAAYAYAASVNTDLYIGVATYKFKGSTPINVDPSRAGIIGYQGKVRIDCSEFTGSVVFSINSSYSYTPAAYYNNLSPALQGLYVLGAKTSGVDGLLVGRETVGSDKSYNGQTEVRECTFDKFDRNIRMGHNSWRFVFYKVNSLNALSPNGILYVPAGLDDSGEILSFYHCQFFDGAGSNIRLSCSSYIMVFNTCSFLNITFFVDSASSATVTCNGCNFENPGSASTRRSTRRYVDISAGHTNVFNIIGGSIVTNSNPGQTQALLYVSTNNLLNLVGVTVPYGGHYQQEQELGYHAFIGGAGTVTTSGVMLQLLNGAGTCPLHSSLSTFSNWDFGYGNLNAWTVDKGTGTSSVVEYLANAGPKGTEGAMRVAPVSVGTNVSQVQAVTNPGMFSMSCMVNIATTSGNAGQISIGFLDAAGNRLPGGVSANLGTTTGWKVIGKNTLRGKVPIGAKQIRVNIQTVAGADVKYAYLLCNVVK
Physico‐chemical
properties
protein length:581 AA
molecular weight: 61342,42590 Da
isoelectric point:8,21168
aromaticity:0,09811
hydropathy:0,06024

Domains

View on InterPro
Domain architecture
YP_009792408.1
1 581 aa
RBD 18–81 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_009792408.1
1 581 aa
Domain Start End Length (AA) Confidence
N-terminal 1 98 98 0,9877
Central domain 99 423 326 0,9894
C-terminal 424 581 157 0,9929
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Klebsiella phage phiKpS2 [NCBI] · taxon 1897515
Uroviricota Caudoviricetes Autographivirales Slopekvirinae Drulisvirus
Host
Klebsiella pneumoniae [NCBI] · taxon 573
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
YP_009792408.1 [NCBI]
Genbank nucleotide accession
NC_047857 [NCBI]
CDS location
range 42279 -> 44024
strand +
CDS
ATGGCACTAGTAGATTTAGTGAGGGCTGGGGGATATTCTATTGAGTACCCGCAATTCTCCAGTATGGCTAAGCTAAAAGCATTCCCACACTCTGAGGACGGGCAACTTGTTAGGCTGTTGTCTTGGCATGAGGGGGTTGGTTTAGGTGGTGGGCTGTTCAAGGTCAGCACCAGCAGCACCGCTACAGGTAACGATGGTACGGTAGTAGTGGCTAGTAATGGGGTGCGGCTGCTTCGAGTAGTAAACGGACCTATCTGGGCAGATATGTTTGGTGCACTGCCGAATTCAGATATAGACAGTATGCCAGCAGTGGCTGCGGCTTATGCGTACGCTGCTTCTGTGAATACGGACCTGTATATCGGTGTGGCGACTTACAAATTCAAGGGTAGCACTCCAATTAATGTAGACCCATCCAGGGCCGGTATTATTGGCTATCAAGGTAAGGTGCGCATTGACTGCTCCGAGTTTACTGGCTCGGTTGTGTTTTCTATAAACAGCAGCTATAGCTATACCCCAGCAGCCTACTACAACAACCTTAGCCCGGCCCTGCAGGGGCTCTATGTGCTTGGTGCTAAAACGTCCGGAGTAGACGGACTACTGGTTGGCAGGGAAACAGTAGGGTCGGACAAGAGCTATAACGGGCAGACAGAGGTTCGTGAGTGCACGTTCGATAAGTTTGACCGCAACATCCGAATGGGGCACAACTCTTGGCGCTTTGTGTTCTACAAAGTAAACAGCCTAAACGCTCTCAGCCCTAACGGGATATTGTATGTACCGGCCGGACTAGATGACTCTGGGGAGATTCTGTCGTTCTACCACTGCCAGTTCTTCGATGGTGCAGGTAGTAATATCCGCTTGTCTTGCTCCTCGTACATTATGGTATTTAATACCTGCTCGTTCCTGAACATCACGTTCTTTGTGGATTCGGCGAGTAGTGCGACAGTAACCTGTAACGGATGCAACTTCGAAAACCCTGGAAGTGCTAGTACCCGTAGAAGTACCCGTAGATACGTGGACATTAGTGCTGGGCACACTAACGTATTCAACATTATCGGGGGCAGTATAGTTACAAACAGCAACCCTGGACAGACTCAGGCGCTGCTGTATGTCTCTACCAACAACCTACTGAACCTTGTAGGTGTAACTGTTCCTTACGGCGGGCACTACCAGCAGGAGCAGGAGCTCGGGTATCACGCATTCATCGGAGGGGCCGGTACAGTCACAACCTCTGGGGTTATGCTGCAGCTACTCAACGGGGCGGGTACGTGTCCTTTGCACTCTAGTCTTAGCACGTTCAGTAACTGGGATTTTGGTTATGGGAACCTGAATGCTTGGACGGTAGATAAGGGGACTGGTACATCCTCTGTGGTAGAGTATCTGGCTAATGCTGGACCTAAAGGTACAGAGGGAGCTATGCGAGTTGCTCCTGTAAGTGTCGGTACCAACGTATCGCAAGTACAGGCAGTAACTAACCCCGGCATGTTCAGTATGTCCTGCATGGTGAACATTGCGACGACCTCCGGTAACGCAGGGCAGATATCTATTGGGTTCTTGGATGCTGCAGGTAACCGCCTGCCTGGTGGGGTCTCGGCTAACCTGGGCACTACCACGGGTTGGAAGGTAATCGGCAAGAACACCTTGAGGGGCAAAGTCCCAATCGGTGCAAAGCAGATTCGTGTGAACATTCAGACCGTGGCCGGTGCAGACGTTAAGTACGCGTACTTGCTGTGCAACGTGGTCAAGTAA

Genome Context

Tertiary structure

YP_009792408.1
ESMFold structure
Source ESMFold
pLDDT 83.2
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
A Klebsiella pneumoniae bacteriophage and its effect on 1,3-propanediol fermentation Shen,J., Zhou,J., Xiu,Z., Mu,Y., Fu,H., Sun,Y. and Xu,Y. 2016-10 — GenBank