Protein

View in Explore
Genbank accession
YP_005087508.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,76
TSP
Evidence RBPdetect2
Probability 0,53
Protein sequence
MALTQVSSAGIKNAEVKTEDILDANITTAKIAADAITAAKIADDAIGAEHIETLDATVDWNDDVGVRFGASNDLQIRHNNSGKSIIYHSPASAVLSIAADHLNLADYGNEHPFITCDRDGSVDLYYDNSKKLETTANGIQINDYLLALKAGSGSDAHLQLIGDNGAQNNDFFRFTSGAGISAWENYSSGSWVTNLRVKETGEVQIPNDTGKYECGASGDLKIYHDGSNSIIKNTTGTLQITADSSEFVNAANSEYKARYINNGAVELYHDGSLRSYTSANGFQVKKASSDDVEFRLVNTQNTTAGATNTILSEHDARTTAKIVFGRNNDANDFSASAASTQGDIQFYTTASGTLTQHGRFINTGYFHVCNDGNFVDCSDSHAARSTNASWAFRAVNSHASTPYGVHAYFNNSDPDTGNYPFFLGQDQTTTRFRVQSNGNVENHDNSYGSISDIKLKENIVDAGSQWEDIKAIKVRNFNFKASKSKKKLLGVVAQELETTSPGLVVETPDEDLDHNDLGTTTKSVRYSILYMKAIKALQEAMAKIETLETEVAALKAK
Physico‐chemical
properties
protein length:557 AA
molecular weight: 60275,25960 Da
isoelectric point:5,08024
aromaticity:0,08259
hydropathy:-0,45566

Domains

View on InterPro
Domain architecture
YP_005087508.1
1 557 aa
CHP 451–551 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_005087508.1
1 557 aa
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,9158
Central domain 28 226 200 0,1213
C-terminal 227 557 330 0,9631
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Cyanophage NATL1A-7 [NCBI] · taxon 445693
Uroviricota Caudoviricetes Autographivirales Cheungvirus Cheungvirus NATL1A7
Host
Prochlorococcus marinus str. NATL1A [NCBI] · taxon 167555
Bacteria Cyanobacteria Prochlorales Prochlorococcaceae Prochlorococcus

Coding sequence (CDS)

Genbank protein accession
YP_005087508.1 [NCBI]
Genbank nucleotide accession
NC_016658.1 [NCBI]
CDS location
range 32715 -> 34388
strand -
CDS
ATGGCATTAACACAAGTATCCTCCGCAGGTATCAAGAATGCGGAGGTTAAAACTGAAGACATTCTTGATGCAAATATCACTACAGCTAAAATAGCTGCAGATGCAATTACTGCAGCTAAAATAGCGGATGACGCTATTGGTGCTGAACATATAGAAACATTAGATGCTACTGTAGATTGGAATGATGATGTTGGAGTAAGATTTGGTGCAAGTAATGATTTACAAATAAGACACAATAATAGTGGTAAAAGTATTATTTACCATTCACCTGCCTCGGCAGTATTATCTATCGCAGCAGATCATTTAAACTTAGCTGATTATGGTAATGAACATCCGTTTATAACTTGTGATAGAGACGGGTCAGTAGACTTATATTATGACAACAGTAAGAAGCTTGAGACAACTGCTAATGGAATACAGATTAATGATTATTTACTTGCATTAAAAGCAGGTAGTGGATCTGATGCTCATTTACAATTAATAGGTGATAATGGAGCGCAGAATAATGATTTCTTTAGATTTACTTCTGGTGCTGGTATTTCTGCATGGGAAAATTATAGCAGTGGAAGTTGGGTAACAAATCTTCGTGTCAAAGAAACTGGTGAAGTACAGATACCAAATGATACAGGGAAGTATGAATGCGGTGCTAGTGGAGACTTAAAAATCTATCATGATGGATCCAACAGCATTATTAAAAACACTACTGGCACTTTACAGATAACGGCTGATAGCTCAGAATTTGTAAATGCTGCTAATTCTGAATACAAAGCAAGGTATATAAATAACGGGGCTGTAGAACTCTACCATGATGGTTCACTCAGATCATACACATCAGCCAATGGTTTTCAAGTTAAAAAGGCAAGTTCAGATGATGTAGAATTTAGATTAGTCAATACTCAAAATACTACTGCTGGGGCTACTAATACTATTTTATCTGAACATGATGCTAGAACTACAGCTAAGATAGTATTTGGTCGTAATAATGATGCTAACGACTTTAGTGCATCAGCAGCTTCGACTCAAGGTGATATTCAGTTTTATACAACAGCTAGCGGTACTCTAACACAGCATGGAAGATTTATTAACACTGGTTATTTTCATGTTTGTAATGACGGTAACTTTGTAGATTGTTCTGATTCACATGCAGCTAGAAGCACTAATGCAAGTTGGGCTTTTAGAGCAGTTAATTCTCATGCTTCTACTCCTTACGGAGTCCATGCGTATTTTAATAACTCAGATCCCGATACTGGTAACTATCCTTTCTTTCTAGGTCAAGATCAAACAACAACTAGATTTAGAGTACAATCTAACGGAAATGTTGAAAACCATGACAACAGTTATGGATCGATATCTGATATAAAATTAAAAGAAAATATTGTTGATGCTGGATCGCAATGGGAGGATATAAAAGCAATTAAAGTTCGTAATTTTAATTTTAAAGCAAGTAAATCTAAGAAAAAACTTTTAGGTGTAGTAGCTCAAGAATTAGAAACTACTTCACCTGGATTAGTTGTTGAAACTCCTGATGAAGATTTAGATCATAACGACCTTGGTACTACTACTAAGTCTGTTAGATACTCAATCTTATACATGAAAGCAATTAAAGCCTTGCAAGAAGCTATGGCAAAAATAGAAACATTAGAAACGGAAGTAGCCGCCCTAAAGGCTAAATAA

Genome Context

Tertiary structure

YP_005087508.1
ESMFold structure
Source ESMFold
pLDDT 69.6
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage NATL1A-7 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank