Protein

View in Explore
Genbank accession
QCW23079.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MSRASTLSGFSTAIGQPTDLNVGVVTATRIDADNITASNTYEFNNLSITGIATFSDTVSIGSTLVGVTTISSSGIHSPLGVGTFLSVDTRTLLGNVSVAGTLTYEDVTNVDSLGIITTRGGIHVTGAGSSVGIGSTGPEVSLDVSQNTDAIGLPKGTTAQRPTGVEGFIRFNSTSKALEIYDGTNWVEIITDYFPSGSVILG
Physico‐chemical
properties
protein length:202 AA
molecular weight: 20614,59060 Da
isoelectric point:4,36117
aromaticity:0,05941
hydropathy:0,20792

Domains

View on InterPro
Domain architecture
QCW23079.1
1 202 aa
RBD 132–191 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QCW23079.1
1 202 aa
Domain Start End Length (AA) Confidence
N-terminal 1 22 22 0,6741
Central domain 23 191 170 0,4534
C-terminal 192 202 10 0,9669
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Synechococcus phage S-B05 [NCBI] · taxon 2484637
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Synechococcus sp. MW02 [NCBI] · taxon 1620844
Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus

Coding sequence (CDS)

Genbank protein accession
QCW23079.1 [NCBI]
Genbank nucleotide accession
MK799832 [NCBI]
CDS location
range 192954 -> 193562
strand +
CDS
ATGTCTAGAGCAAGTACATTATCAGGTTTTTCAACTGCTATAGGGCAACCTACCGACCTGAATGTTGGTGTGGTTACCGCAACTCGTATTGACGCTGATAACATCACAGCATCAAATACTTATGAATTCAACAACTTAAGTATCACTGGTATCGCAACATTCAGTGACACTGTAAGTATTGGTTCCACATTAGTCGGTGTTACCACCATCAGTTCAAGTGGTATTCATAGTCCACTTGGTGTTGGTACATTCCTCAGTGTAGACACCAGAACTCTTTTAGGCAATGTATCAGTTGCTGGTACACTAACTTATGAGGATGTCACCAACGTTGATTCACTTGGTATCATCACTACACGAGGTGGTATTCATGTCACTGGTGCAGGTAGTTCGGTAGGTATTGGAAGCACTGGACCTGAAGTCAGTCTTGATGTTTCACAGAACACTGATGCTATTGGACTTCCAAAAGGTACAACAGCACAGAGACCCACAGGTGTGGAGGGTTTCATTAGATTCAATAGTACAAGTAAGGCGTTAGAGATATACGACGGTACAAACTGGGTAGAAATCATTACTGATTACTTCCCATCAGGTTCAGTAATTTTAGGTTGA

Genome Context

Tertiary structure

QCW23079.1
ESMFold structure
Source ESMFold
pLDDT 65.5
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-B05 from the Bohai Sea, China Jiang,T. 2020-10 — GenBank