Phage RBP Database

Genbank accession

XPO96510.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,91

TF

Evidence RBPdetect2

Probability 0,95

Protein sequence

MALYRRGTASMDADGTVHGTDTKWKDQLALIRVGATIVFLEQPIKLAVISDIVSDTELKAISTDGQTAANGKYVILLNDSLTVNGLAQNVAETLRYYQSKETEIAAAIDLINQLDMNKLEQIVADVNKAKSDSQAAQNQAELARDAANAARDETNSIKNQTQQIVDGAIGGINAAKDQAITDIGSKESSVISHIDTEEASAIQAINESKGDLSVYVNDAQTAAQTATSAKNDAQEARDTAVIAKDAAAVSAQEAKDAANSVDAENLLHKDNNLNDLTDKSAARQTLNAIGVGDYGIGGGAPGVRWDDADESTLIASNAGSPLGDFSVAGLHVKFASNYAVQFAARQSRFFWRTKENGVLQNWCEAVKPKDYGLGIENSVPPPNTQACFFSQSIGTQTWAPANGAGFQSAYAPERVAQVMVGALPALYYRWNDSGNAQVSSTTKTWSRVQDAGTSDARVKDIKGNLNVEAALDNINRLEFKLFRYTFDEPDRSARRGIIAQQAATVDKEYVHYHGTPGMMTLDLNPLLSDSMAAIKALRLRDEDNKKRISDLESRVSALEDMIKKLTESK

Physico‐chemical properties

protein length:	569 AA
molecular weight:	61243,27510 Da
isoelectric point:	4,93393
aromaticity:	0,05800
hydropathy:	-0,39156

Domain architecture

XPO96510.1

1 569 aa

CHP 454–555 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil IPR030392 Coil

IPR030392
CHP

IPR030392

XPO96510.1

1569 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0253
STR

DC_0253

XPO96510.1

1569 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	119	153	Coils	Coil	-	-	-	-
IPR030392	CHP	DC_0088	454	510	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	454	555	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	548	568	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Phage

Escherichia phage EF3-1 [NCBI] · taxon 3385241

Viruses

Host

Escherichia fergusonii [NCBI] · taxon 564

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

XPO96510.1 [NCBI]

Genbank nucleotide accession

PQ571291.1 [NCBI]

CDS location

range 16680 -> 18389
strand -

CDS

ATGGCTTTATATCGACGCGGTACGGCATCAATGGATGCAGACGGAACGGTTCACGGAACCGATACGAAATGGAAAGACCAGCTTGCTCTTATTCGCGTAGGTGCAACTATCGTGTTCCTTGAGCAACCAATTAAGCTGGCGGTGATTAGCGATATAGTTAGCGACACCGAATTAAAGGCTATCTCTACCGACGGTCAAACGGCGGCTAACGGTAAGTATGTGATCCTACTTAACGATTCACTGACTGTTAACGGCTTAGCTCAAAACGTTGCTGAGACGCTTCGATACTATCAAAGCAAAGAGACTGAGATCGCGGCAGCTATAGATCTGATAAATCAGCTTGATATGAATAAACTTGAGCAAATAGTTGCTGATGTTAATAAGGCGAAATCTGATTCTCAAGCTGCGCAAAATCAGGCTGAATTAGCGCGTGACGCCGCCAACGCTGCACGCGATGAAACTAACTCAATCAAGAATCAGACACAGCAGATTGTTGACGGGGCTATCGGTGGAATTAATGCCGCAAAAGATCAGGCTATCACTGATATCGGATCTAAGGAATCATCTGTCATCTCTCATATCGACACGGAAGAGGCTTCGGCTATTCAGGCAATTAATGAATCTAAAGGTGATTTGTCGGTTTACGTTAACGACGCTCAAACGGCAGCGCAAACGGCAACCTCTGCAAAAAACGATGCACAGGAAGCGCGTGATACAGCGGTTATCGCAAAAGATGCAGCGGCAGTAAGCGCACAGGAAGCTAAAGACGCAGCTAATAGCGTAGACGCAGAAAATCTACTTCATAAAGATAACAATCTAAACGACCTTACTGACAAATCGGCGGCGAGGCAGACTCTAAACGCAATCGGTGTTGGTGACTATGGGATCGGCGGCGGCGCACCTGGCGTACGCTGGGACGACGCGGACGAAAGCACCCTCATTGCGTCTAACGCAGGATCTCCTCTAGGTGACTTCTCTGTTGCGGGACTGCATGTTAAGTTCGCTAGCAATTACGCTGTGCAGTTCGCCGCACGTCAAAGCCGTTTTTTCTGGCGAACTAAGGAGAATGGAGTGCTTCAGAACTGGTGCGAAGCGGTGAAGCCGAAGGACTACGGGCTGGGGATTGAAAACTCAGTCCCTCCACCGAATACGCAGGCTTGCTTTTTCTCGCAGTCGATCGGCACCCAGACCTGGGCACCAGCAAACGGAGCAGGATTTCAATCGGCATACGCTCCAGAGCGTGTTGCTCAGGTTATGGTCGGTGCGTTGCCAGCGCTATACTATCGTTGGAATGACTCCGGTAACGCGCAAGTCTCCTCTACGACGAAAACATGGTCGCGGGTGCAAGATGCTGGTACGTCTGACGCCCGTGTGAAGGATATTAAGGGTAATTTAAATGTGGAAGCGGCGCTGGATAACATCAACCGCCTTGAGTTTAAGTTGTTCCGTTATACGTTTGATGAACCTGATCGATCTGCGCGACGTGGAATCATCGCACAACAAGCAGCCACGGTTGACAAGGAATACGTTCATTACCACGGGACGCCAGGGATGATGACTCTTGATTTAAATCCTCTCCTATCTGACAGCATGGCAGCAATAAAGGCATTAAGGTTAAGAGATGAGGATAACAAAAAAAGAATTTCCGATCTTGAATCAAGAGTTTCCGCACTTGAGGATATGATAAAAAAACTAACGGAAAGCAAGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)