Phage RBP Database

Genbank accession

AFD02697.1 [GenBank]

Protein name

gp10 baseplate wedge subunit protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,95

Protein sequence

MSKQTLNVGTLANDNSGDTIRNGGIKINSNFDELYAAVGNGVIAQIDVANAASGEFLRYNGTQFVPTEITELTSNLNTNGQSIVSSSGVNIPITPGSGANVTIGYNTNTATFDSANNLVDFPTKIKYVNQYTTLAAGPAAGDNLGYYYTVNGDDNPYVNINITAGGAGNVKAKLVTEYSSIDILSDVDTTTVAPTEGQVLKWDNTAGKWEPADDQAGISSLNIFSTFDSDSGSTTADAQADTLVIAGGTDIGTAVVGDTLTINYTGTPITSMAALTDTDFTGGIIQGDSLYWNGTDWVKTRSPIVWWELNANGASDYTFAGPGFPTTQNDPTLYVYRGFTYAFDNSVQGGGHPFRLQSTQGLTGTPYTDGQSGSGSNVLYWTVPLNAPNTLYYQCTIHALMNGTINVVS

Physico‐chemical properties

protein length:	409 AA
molecular weight:	43041,47820 Da
isoelectric point:	4,05003
aromaticity:	0,09780
hydropathy:	-0,20196

Domain architecture

AFD02697.1

1 409 aa

ATT 1–118 · STR 119–409

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR036240
STR

IPR036240

IPR008987
ATT

IPR008987 IPR008972

AFD02697.1

1409 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0210
STR

DC_0210

AFD02697.1

1409 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036240	STR	IPR036240	1	229	Merged direct domain	Gp9-like superfamily	Central	Low	Positional only	146 proteins / 146 hits
IPR008987	ATT	DC_0752	3	118	InterPro cluster	Baseplate structural protein Gp9/Gp10, N-terminal domain	Central	Medium	Text match	242 proteins / 243 hits
IPR008972	STR	IPR008972	189	409	Merged direct domain	Cupredoxin	Central	Low	Positional only	3 proteins / 3 hits

Proteins with similar domain architecture

Phage

Synechococcus phage S-MbCM6 [NCBI] · taxon 3126011

Uroviricota Caudoviricetes Pantevenvirales Namakavirus Namakavirus smbcm6

Host No host information

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)