Phage RBP Database

Genbank accession

AFM76573.1 [GenBank]

Protein name

hypothetical protein

RBP type

TF

Evidence RBPdetect

Probability 0,91

TF

Evidence RBPdetect2

Probability 0,94

Protein sequence

MAYTEIAMAVGNSPETLARNVKMMISSGFQPYGDVQMLSGTLFGMKMAKGTANNVEDFMVTSDTTIQGLVNRVNRYLAQGWRRFGNAHFEDGAYISALAKGDFVSDEGGGSGEAGPQGPVGPAGPAGVAGPQGPQGPQGPAGATGPAGAAGAKGDTGPAGVAGPQGPQGETGEAGPQGSIGPTGATGPSGPKGDKGDAGPVGPAGLTFRGMYDAATAYVKDDVVTFNSSSWFATTAVTGENPDISDSWELLAAQGAPGPQGATGPTGPTGPAGPAGIQGAQGERGIQGEQGPSGPQGLQGAAGPVGPQGPAGPQGERGIQGPVGPQGPIGPKGDKGDAGMSRSFLKVRTSPNTGTNHMIRLPAPLSNISIGIRLDSNIRFSIRAWIDDGTTARTIRGNIEAFNETGVYTNTTVRTSISTSTETGTVLLGDIGEFQGIRPYTLSFYETTTDTMWRATINLFTAGYIVNGNQALCIELVRLDA

Physico‐chemical properties

protein length:	481 AA
molecular weight:	48540,21370 Da
isoelectric point:	4,87135
aromaticity:	0,06237
hydropathy:	-0,32141

Domain architecture

AFM76573.1

1 481 aa

STR 151–228 · STR 285–340 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR050149
Unmapped

IPR050149

IPR008160
STR

IPR008160 IPR008160

G3DSA:1.20.5.320
STR

G3DSA:1.20.5.320

AFM76573.1

1481 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1122
ATT

DC_1122 DC_0876 DC_2298

DC_1535
RBD

DC_1535

AFM76573.1

1481 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR050149	Unmapped	-	109	340	InterPro	Collagen superfamily	-	-	-	-
IPR008160	STR	DC_0536	151	205	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	181	228	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
IPR008160	STR	DC_0536	285	340	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits

Proteins with similar domain architecture

Phage

Enterobacteria phage vB_EcoS_Rogue1 [NCBI] · taxon 1147155

Uroviricota Caudoviricetes Drexlerviridae Rogunavirus Rogunavirus rogue1

Host

Escherichia coli [NCBI] · taxon 562

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

AFM76573.1 [NCBI]

Genbank nucleotide accession

JQ182736 [NCBI]

CDS location

range 9564 -> 11009
strand +

CDS

ATGGCTTACACAGAAATTGCTATGGCAGTAGGTAATTCACCTGAAACCTTAGCCAGAAACGTAAAAATGATGATTTCATCAGGATTCCAGCCATATGGCGACGTGCAGATGCTGAGCGGTACCCTATTTGGCATGAAGATGGCAAAAGGAACAGCAAACAACGTTGAAGACTTCATGGTTACATCAGACACCACAATTCAGGGTTTAGTTAACAGGGTTAACCGATATCTAGCACAGGGCTGGCGAAGGTTTGGTAATGCCCACTTCGAGGATGGCGCTTATATTTCAGCTCTGGCGAAAGGTGATTTTGTAAGTGATGAGGGCGGAGGTTCAGGTGAAGCAGGTCCACAAGGTCCGGTTGGTCCAGCTGGCCCCGCAGGCGTAGCTGGTCCGCAAGGTCCGCAAGGTCCACAAGGCCCAGCTGGTGCTACCGGCCCGGCAGGCGCGGCTGGCGCTAAAGGTGACACTGGCCCCGCAGGCGTAGCTGGTCCGCAAGGTCCACAAGGTGAGACTGGAGAAGCTGGTCCACAGGGTTCTATCGGCCCAACAGGCGCCACAGGTCCATCCGGACCAAAAGGTGATAAAGGTGATGCAGGTCCAGTTGGCCCTGCGGGATTGACTTTCCGCGGGATGTACGACGCAGCGACAGCTTACGTTAAAGATGATGTTGTTACATTCAATAGCTCCAGCTGGTTTGCTACCACCGCTGTGACCGGAGAGAATCCAGATATTAGCGATTCCTGGGAGTTGCTGGCCGCACAGGGCGCCCCGGGTCCGCAAGGCGCAACTGGTCCAACAGGTCCAACTGGCCCGGCAGGTCCGGCAGGTATTCAAGGGGCTCAGGGAGAGAGAGGGATTCAGGGTGAGCAAGGTCCGTCAGGCCCGCAAGGCTTGCAAGGTGCAGCTGGTCCAGTTGGACCTCAAGGCCCAGCAGGTCCGCAGGGTGAGCGAGGAATACAGGGTCCGGTTGGCCCTCAAGGTCCAATTGGCCCTAAAGGCGATAAAGGTGACGCAGGGATGTCAAGATCATTCCTTAAAGTTAGAACATCACCAAATACAGGCACTAATCACATGATTAGGCTTCCAGCACCTTTAAGCAATATTTCTATAGGGATAAGACTGGATTCAAACATTCGTTTTAGTATTAGGGCTTGGATTGATGATGGCACTACAGCTAGAACTATAAGGGGTAATATTGAAGCGTTCAATGAAACTGGAGTTTACACTAACACAACAGTAAGAACTTCGATATCTACATCAACAGAAACTGGCACAGTACTTCTTGGTGATATTGGAGAGTTCCAAGGTATCAGGCCATACACTCTTAGTTTTTATGAAACCACAACAGACACAATGTGGAGAGCAACCATAAATCTATTTACAGCTGGATACATTGTGAATGGAAACCAAGCCCTATGCATAGAGCTAGTAAGGCTTGATGCATAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)