Protein

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Genbank accession
AFD22280.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,66
TF
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
METFKQGEVTARIDERGIDLGNINVNLYTMDNSTAALDIHIKKRNIFSEEKEFIPVNLNQTSFKPVLHLITEDNSIFTNEELEVVKAEEGHVRYNVSDYVTKHVGRVQAKLFLIDEDSSTDDSSHVADFYFKVNDSGITKAIGKEVHVDMLDDIVERILLKDIERFRGPKGDKGDIGPQGPKGDRGADGVDGEIGPAGPAGPMGPKGDTGEKGLQGEQGPPGKDGTTLSYIDTDWLPLPLINGVMQAGSANQPKYRLVSINDTNLLFFKGAVTNITAKTMTVAKIPKNILQKMDSYSEYTKASINSYMNTMTMYNITITTDEGLKIRLEPNSESDPNRVYYIEGTISL
Physico‐chemical
properties
protein length:348 AA
molecular weight: 38384,73860 Da
isoelectric point:4,92393
aromaticity:0,06897
hydropathy:-0,47874

Domains

Domains [InterPro]
IPR018913
8–157
IPR018913 IPR008160
G3DSA:2.60.40.3350
19–139
G3DSA:2.60.40.3350 PTHR24637
AFD22280.1
1 348
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage StB12
[NCBI] 		1147042 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus hominis
[NCBI] 		1290 Bacteria > Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFD22280.1 [NCBI]
Genbank nucleotide accession
JN700520.2 [NCBI]
CDS location
range 39489 -> 40535
strand +
CDS
ATGGAAACGTTCAAGCAAGGTGAAGTAACTGCTCGCATAGATGAGCGAGGTATTGACTTAGGTAACATCAATGTCAATCTCTACACAATGGATAACTCTACTGCTGCGTTAGATATTCATATTAAAAAACGTAATATCTTTAGCGAAGAAAAAGAATTTATTCCAGTAAATCTAAATCAAACAAGTTTTAAACCTGTATTACATCTAATTACTGAAGATAACTCTATTTTTACTAATGAAGAATTAGAAGTAGTGAAAGCAGAAGAAGGTCATGTGCGTTACAACGTATCTGACTATGTAACAAAGCACGTAGGACGTGTACAAGCAAAATTATTCTTAATTGATGAAGATAGTTCTACTGATGATAGTTCGCATGTGGCAGATTTCTATTTCAAAGTAAACGATAGTGGTATCACGAAAGCAATCGGTAAAGAAGTTCACGTCGATATGCTAGATGATATCGTTGAAAGAATTCTATTAAAAGACATTGAGCGTTTCAGAGGGCCAAAAGGCGATAAAGGTGACATTGGTCCACAAGGCCCGAAAGGTGATAGAGGTGCTGATGGAGTAGATGGTGAGATTGGTCCAGCAGGTCCAGCAGGTCCTATGGGTCCTAAAGGTGATACTGGAGAAAAAGGTTTACAAGGTGAACAAGGGCCACCGGGTAAAGATGGAACAACTCTTTCTTATATAGACACAGACTGGCTCCCTCTTCCATTAATCAATGGAGTAATGCAAGCTGGAAGTGCAAATCAACCAAAATATAGATTAGTTTCTATAAACGATACTAATCTACTATTTTTTAAAGGTGCAGTAACGAATATTACTGCAAAAACAATGACAGTTGCAAAAATACCGAAAAACATTTTACAAAAAATGGATAGTTATTCAGAGTACACAAAGGCTAGTATAAATTCCTATATGAATACAATGACTATGTATAACATAACTATAACAACGGATGAAGGTTTAAAAATAAGGTTAGAACCTAATAGTGAATCAGACCCTAATAGAGTTTATTATATCGAAGGAACAATATCATTATAG

Tertiary structure

PDB ID
49d71d7483a707a2621903671c2deae3f5c041555591d17d21f099566b7a63a1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50