Protein

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Genbank accession
BAR94561.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPPITWRNIGTTVSPGSARSLTAGTTGVQSALASLGDIIKQQQEMAVANAGVQREANTQNYLDQVASADLSQLQDPDFVAGLAGQRDAMGMRLDRAATRDAILNRRQTLQKDAVAQQAFADQQAEVEQRGVVDELRTLAAQGRGRDVDAILAERQLINEGEIRKELAGVQDNLMQRQYRAAGEQRAQAAADRAAEAHQLSMTAGRENLAYQRDLRQDAARERNDNKLADSAVMEISNQFRESRETANALLRDIGKEQGLPTDDTGLPDVSRMDPDQEASYREAVQSSGLSANLSATNEKQALVKTLRESGASPSAIQRATKQLDIMQGMDALAPEDAVKAENQVTAVNAELDRIQKQMTRNYETEVARNPFIEPSKTPLEDVTKTVEKLGKAGMPESERRLVADTLVEWSTNGMTTDGGQKIVVPSQLIAAAAASTDADSWIRNDAKSYLKNLQSLLGNKGMEQMAKDADSVRSDFLKEMTKLENDKLGNTYRVINSAKAKKGVSINPNDTVDRLLKRNF
Physico‐chemical
properties
protein length:520 AA
molecular weight: 56796,70170 Da
isoelectric point:5,19147
aromaticity:0,03077
hydropathy:-0,65019

Domains

Domains [InterPro]
Coil
337–357
Coil
BAR94561.1
1 520
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage KPP21
[NCBI] 		1678082 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas
[NCBI] 		286 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAR94561.1 [NCBI]
Genbank nucleotide accession
LC064302 [NCBI]
CDS location
range 8528 -> 10090
strand -
CDS
ATGCCGCCTATCACTTGGCGTAACATTGGAACCACGGTAAGCCCCGGCAGTGCTCGTTCGCTGACTGCCGGGACTACCGGTGTCCAATCTGCACTGGCTTCGCTCGGCGACATCATCAAGCAACAGCAAGAGATGGCCGTGGCGAATGCCGGTGTACAGCGTGAAGCCAACACGCAAAACTACCTGGACCAGGTTGCCTCGGCTGACCTGAGCCAACTCCAAGATCCTGATTTCGTCGCTGGTTTGGCGGGTCAACGTGATGCCATGGGCATGCGTCTGGACCGTGCCGCAACCCGTGATGCGATCCTCAACCGTAGACAAACCCTGCAAAAGGATGCTGTTGCTCAACAGGCATTCGCCGACCAGCAGGCTGAAGTAGAACAGCGTGGTGTCGTAGATGAGCTACGCACTCTGGCTGCTCAAGGCCGTGGTCGTGATGTGGACGCCATTCTGGCCGAACGTCAGTTGATCAACGAAGGGGAGATCCGTAAGGAACTGGCGGGTGTCCAAGACAACCTGATGCAACGTCAGTACCGGGCAGCCGGTGAACAACGTGCCCAGGCTGCTGCGGATCGTGCTGCTGAAGCTCACCAGTTGTCCATGACCGCTGGCCGGGAGAACTTGGCGTACCAGCGTGATCTGCGTCAGGACGCAGCACGAGAACGGAACGACAACAAGCTGGCCGACAGTGCAGTAATGGAGATCTCCAACCAGTTCAGGGAAAGCCGGGAAACGGCCAATGCTCTGTTGCGAGATATCGGCAAAGAGCAGGGACTTCCCACTGATGACACTGGTTTGCCAGATGTGTCCCGTATGGATCCGGATCAAGAAGCCAGCTACCGAGAGGCAGTTCAGTCCTCTGGTTTGTCAGCCAACTTGTCGGCGACCAACGAGAAGCAAGCCTTGGTCAAGACCCTACGTGAGTCTGGTGCTTCGCCGTCTGCTATTCAGCGAGCCACGAAGCAGCTGGACATCATGCAAGGCATGGATGCACTGGCACCTGAAGATGCTGTAAAGGCGGAGAACCAGGTGACTGCGGTCAATGCTGAGTTGGATCGAATCCAGAAGCAGATGACCCGCAACTACGAGACCGAAGTTGCTCGTAACCCGTTCATCGAACCGAGCAAGACTCCGCTGGAAGACGTTACGAAGACGGTGGAGAAGCTGGGTAAAGCTGGCATGCCTGAATCGGAACGTCGTCTGGTTGCGGATACTCTGGTCGAATGGTCCACCAACGGTATGACTACCGATGGCGGTCAAAAGATCGTAGTTCCTTCCCAGTTGATCGCCGCTGCTGCTGCATCTACCGATGCCGATTCCTGGATCCGGAACGATGCGAAGAGTTACCTCAAGAACCTACAAAGTCTCTTGGGTAACAAGGGTATGGAGCAAATGGCCAAGGATGCAGATTCCGTGCGGTCGGACTTCCTCAAGGAGATGACCAAACTGGAAAATGACAAACTGGGTAATACCTATAGAGTAATCAACTCGGCAAAGGCCAAAAAGGGTGTTAGTATCAACCCCAATGACACCGTTGATCGATTGCTCAAAAGGAATTTCTGA

Tertiary structure

PDB ID
b286cc84c7c7404b5340cad7cfcd804907750b4afeb57fc6f88a01e2537ba65b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7999
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Pseudomonas aeruginosa phage KPP21 belonging to family Podoviridae genus N4-like viruses, isolated in Japan Shigehisa,R., Uchiyama,J., Kato,S., Takemura-Uchiyama,I., Ujihara,T., Sakaguchi,Y., Okamoto,N., Shimakura,H., Daibata,M., Sakaguchi,M. and Matsuzaki,S. 2016 26616567 GenBank