Protein

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Genbank accession
YP_010053683.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,54
Protein sequence
MPVIHVQKMPGTPKETGIVPAGTNLWKWLNKSNLPASISVAVNGRVLDEDDELSFCLRDGDVVNVYCQPSGAIGDLIGAILKPVTKIFSFLTPKVSTPKTDTSSKTSPNTSLKAQTNIARNGEARPDNFGQIRAFPDLLQESLFEYINNIKYVTEFMNFGLGKYDVSSVRYSESNLGSLAGASYTIYQPGEVIPVVYEPYAFDDVDGQELYGPNELNTNPPPVVIETATTTTVTEMEYVNGQFLAKIPKNDDFDYFVDLTLPHDVTFGINVSFPTVGGVTVTRDITLSGRLISATETDDGGIPPENYWYTFIITNIDYSGNQLVSSLDGVTINNNYFTISDNQAIVSGPYFSPIEGDQLWVHLQHQTNDGNDFSVLIEWWKIDDDNVQIPGTYQSMSYYKDVDRNDTFYYTIKLTPSAGTGRYAIQMRRTNNSSDTSIIQLEEIHSIVTRTNVSYPDDTVVKVVVRATENATGSRDRKYNALITRHTIGYDRDTGKVRYTIAPSRSFADAVLHNWLITAGNPENTIDIVKLYEIADSLPDERLGYFDCTFDDEDKSIGERLQTICDAARVTAFWDDGVMSFSRDEKREYPATVFNTRNTQSDGYKLSYDISLPGTYDGVNVEYRDPTTNKQANVYYRITDNGIVEGEPTKAKKFDMLYIRNRYQAVDRAILECRRLIYSRRSMEIKALADGEWVNVGDMIQVVDMYDDVQQTGVIEARNGNVFTTSEQLTADDNLYVVITSSDGSTSDRLPATVTGLHTFTCNLPTDFQLNIWDGASVQSESRYVLSTEKELDTTLWVVSQKNPGSDGTTTLTMSEYSDDMYEYVIPSS
Physico‐chemical
properties
protein length:829 AA
molecular weight: 92752,90830 Da
isoelectric point:4,51315
aromaticity:0,10253
hydropathy:-0,39578

Domains

Domains [InterPro]
NF040662
357–823
NF040662
YP_010053683.1
1 829
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SeSz-2
[NCBI] 		2419753 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010053683.1 [NCBI]
Genbank nucleotide accession
NC_054643 [NCBI]
CDS location
range 41158 -> 43647
strand +
CDS
ATGCCAGTAATTCATGTTCAGAAGATGCCAGGCACACCGAAAGAAACGGGGATTGTGCCAGCTGGCACTAACCTGTGGAAGTGGCTGAATAAATCAAACCTACCAGCCAGCATTTCAGTTGCGGTAAATGGCAGAGTGCTTGATGAAGATGATGAGCTTTCATTCTGTCTGCGCGATGGCGACGTGGTCAACGTTTATTGCCAGCCGTCCGGCGCAATTGGCGACCTTATCGGTGCGATACTGAAACCAGTAACGAAGATTTTCTCATTCCTTACGCCGAAAGTATCCACACCAAAAACTGATACCAGCTCAAAAACATCACCGAATACCAGCCTAAAGGCGCAAACCAACATTGCGCGCAACGGCGAGGCGCGTCCTGATAACTTCGGGCAGATTCGCGCATTCCCTGATTTGCTTCAGGAATCATTATTTGAATACATCAACAATATTAAATATGTCACAGAGTTCATGAATTTTGGCCTCGGTAAATATGATGTATCATCCGTGCGTTATTCTGAGTCAAACCTCGGTTCACTGGCTGGCGCTAGCTATACAATTTATCAGCCGGGAGAAGTTATTCCTGTTGTGTATGAACCTTACGCATTTGATGATGTTGACGGTCAGGAACTGTACGGGCCAAACGAACTTAACACCAACCCTCCGCCAGTGGTCATTGAAACTGCAACAACAACCACGGTAACGGAAATGGAATACGTCAATGGACAATTCCTTGCGAAGATACCAAAAAACGATGATTTTGATTATTTCGTTGATCTGACATTGCCGCATGATGTTACATTTGGCATTAACGTATCATTCCCTACAGTAGGTGGAGTTACTGTCACCAGAGATATAACATTGTCTGGAAGGTTAATTTCAGCTACAGAAACTGACGACGGAGGTATACCACCGGAGAACTACTGGTACACATTTATAATTACCAATATAGATTACTCTGGCAATCAACTTGTATCATCACTGGATGGAGTAACCATTAACAATAATTACTTTACTATTTCTGACAATCAAGCCATTGTTTCCGGTCCATATTTTTCGCCAATTGAAGGTGATCAGTTGTGGGTGCATCTTCAGCACCAGACCAATGACGGCAACGATTTCAGTGTGCTCATTGAGTGGTGGAAGATTGACGATGATAACGTTCAGATACCAGGTACATATCAGTCGATGAGCTATTACAAGGACGTAGACCGGAATGACACATTCTACTACACGATAAAATTAACCCCATCAGCTGGCACTGGTCGCTACGCGATTCAGATGCGACGGACAAACAACAGCTCCGACACATCAATCATCCAGCTTGAGGAGATTCATTCAATCGTTACGCGCACCAACGTTTCGTACCCAGATGACACCGTGGTTAAGGTCGTCGTGCGAGCAACAGAGAACGCCACAGGGAGTCGTGACAGGAAATATAATGCACTTATTACGCGTCATACAATCGGTTACGACCGCGACACTGGCAAGGTGCGCTACACGATTGCACCATCCCGTAGCTTTGCTGATGCTGTTTTGCATAACTGGCTAATTACCGCTGGCAATCCAGAAAACACGATAGACATCGTGAAGTTGTATGAAATTGCCGATAGCCTGCCTGATGAGAGATTGGGTTATTTCGATTGCACGTTTGATGATGAGGATAAGTCAATCGGCGAGCGCTTGCAGACCATCTGCGATGCGGCGCGTGTTACTGCATTCTGGGATGATGGAGTGATGAGCTTCTCGCGTGATGAAAAGAGAGAATATCCGGCAACTGTATTTAATACCAGAAACACGCAGAGTGACGGTTACAAGCTGAGTTATGATATCAGTCTTCCAGGCACTTATGATGGCGTTAACGTCGAATATCGCGACCCAACAACGAATAAGCAGGCCAACGTTTACTATCGCATTACAGATAATGGAATTGTCGAAGGCGAGCCAACAAAAGCAAAGAAATTCGACATGCTTTATATTCGCAATCGTTATCAGGCTGTTGACCGCGCAATTCTTGAGTGTCGTCGCCTGATTTACTCCCGTCGCAGCATGGAGATTAAGGCTCTGGCGGATGGCGAATGGGTCAACGTAGGCGACATGATTCAGGTTGTCGATATGTATGATGATGTGCAACAGACTGGCGTTATTGAAGCGCGCAACGGAAACGTATTCACAACAAGCGAGCAACTAACGGCTGATGATAATCTTTATGTTGTGATTACCAGTTCTGATGGCAGCACATCAGACAGATTACCAGCAACAGTGACCGGATTGCATACATTCACCTGCAACCTGCCGACTGATTTCCAGCTGAATATATGGGATGGAGCAAGCGTGCAATCTGAATCTCGCTATGTGCTTAGCACTGAAAAAGAACTGGATACCACTCTGTGGGTTGTCAGCCAGAAAAATCCAGGAAGTGACGGTACAACAACTCTGACCATGAGCGAATACAGTGATGACATGTACGAATATGTCATCCCGTCATCGTGA

Tertiary structure

PDB ID
d8d34b7faa6b4261a56a7def3406899d73b08f8864866f81890986921507f28c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2387
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
SeSz_2, Complete genome sequences of 3 novel enterobacteria, Pakpunavirus like phages Yuan,S., Ma,Y. and Liu,Q. 2020-07-27 — GenBank