Protein

View in Explore
Genbank accession
QIG66676.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MKNSMWHPSGFPRMITGSKGGGKGSSGGGSESPNTLRSKATVRLLDMLGEGEIKGLVNGAKSIYLNETPLVSASGDYNFKGVNWDIRVGLPSQSVMPGASGVEAITNVGAQVKYGAPLTRSLTDPDYDACKVTIRIPALSKADDKGNINGTTLQFVIDIRYQGGAFTTSSGVITLTGKCTSPYDREFYFALPKNPGGASAPWEIRVTRLTPDSDSVKLQNDMYFSSFEGTIEAKFSYPYTAYVGMVVDGEQFNQQIPERKYLIDGRIIKVPSNYTTRLYDVNGNISRNPSYSGVWDGTFKMEWTNNPAWVFYDMVTNDRFGLGDYIDVSQVDKWGLYEIAKYCDEYVPNGIGGVEPRMTFNGVVATKREAYDTLSSMASCFRGMAYWSSGSIVTTQDRPKDPVVLASQSNVVDGQFDRQSTALKSRHTVAMAKFLNPQDFYREDYAIYQDEAGIAKYGYRDTKFEAVGCTSRGQAYRMAKWTVLTELYEKGTTTYQAGLDHAGVRPGDIIAIQDPSLANVEFGGRISGGKPELITNGFFGAGITGWTSSVSSGGAVTWGAGNVTIKGNGTTRSYIEQAITTEVGKTYRMQITPSGGQAVTVWVGTTQGASDLSSTTPSAYSEISFTATGTTTWLRFSRQPTTTVTIDNISVREQTNTPSVINVDTPVTFEGGNLYWLNVQMPDGSIEESNIVIAAYDTPTTQITVSPAFTKTPDAESQWIISRNDLVPELIRCITIKESEPNKYDVMGLQYEPSKFAAVDVDAQFSLINTSDFPTGELGVPTAPLFNEYAYALGQTGTIMALDWSITAPKDPRIGQFEWQYQTRTETGTLNGWQAAGFTYDPIITIQDLEAGLYNFRVRCLGSFGVGVSGWTVSNDILLQGLNLPPATPTQFRISVLGDQSQFTWRVANQLNIRFYEIRHTPNVVDPEWNSAVVLVKEVAASGIQLPTMAGTFLIKSVSFTGVYSLDAAMIQNGVLGQALNAVEVLDEATAGFLGTKGNTLVVSGDLQLKPYNGNFPPLGVYGFNAPVDLGDEYTSRLSATIDIFGLDVRDTIDKWTSLDTVTALSTARSDQWSFELEYATTLDNPVAVVARASTGTYFDADGILKTAANNVPRYNYTPSDLSAVGVLLAEAAGTNLILQSQTFDNASWTKTNLTVTANAIAAVDGTTTADKLTEDTTASAVHQTAQQFAVTSGQSYVGSTFFKAGSAGRLLRVTMGAAFASNCWASFDPVTELVTLGADAVAAGFIKCLDGNYRVWVKGTATSTGNATLYISMQTSTSPVYTGDGTSFIYVWGAQAEQGAAMTSYIPTTTATVTRAAETITSQPTWTDWEQFITRDVNFRAIKFRAKLISNDPAVTPVLRGLTVNVDMPDRIIAGNDIAVPTAGLSIVFDPPFKGLTGLSMASQDMATGDRALITAKSENGFTIRYFNSTGTAVARTFDYNAVGYGVKK
Physico‐chemical
properties
protein length:1450 AA
molecular weight: 156716,68700 Da
isoelectric point:4,91500
aromaticity:0,10345
hydropathy:-0,16407

Domains

View on InterPro
Domain architecture
QIG66676.1
1 1450 aa
ATT 102–232 · ATT 368–519 · STR 529–655 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
QIG66676.1
1 1450 aa
Domain Start End Length (AA) Confidence
N-terminal 1 527 527 0,8961
Central domain 528 905 379 0,2851
C-terminal 906 1450 544 0,5697
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Rhizobium phage RHph_TM16 [NCBI] · taxon 2509755
No lineage information
Host No host information

Coding sequence (CDS)

Genbank protein accession
QIG66676.1 [NCBI]
Genbank nucleotide accession
MN988459.1 [NCBI]
CDS location
range 6717 -> 11069
strand +
CDS
GTGAAGAACTCTATGTGGCATCCTTCTGGCTTTCCCCGGATGATCACCGGCTCGAAAGGTGGTGGTAAAGGCTCTTCCGGGGGAGGATCGGAAAGCCCGAACACCCTCCGCTCGAAGGCCACCGTCCGCCTCCTCGACATGCTTGGGGAAGGCGAAATCAAGGGCCTCGTCAACGGGGCCAAGTCGATCTACCTGAACGAGACGCCACTGGTCTCGGCTTCGGGCGACTACAATTTCAAGGGCGTCAACTGGGACATCCGTGTCGGCCTCCCCAGCCAGTCGGTGATGCCGGGAGCCTCGGGCGTCGAAGCCATCACCAACGTCGGTGCCCAAGTGAAATATGGTGCACCGCTGACGCGCTCGCTGACAGACCCAGACTATGACGCCTGCAAGGTGACGATCCGTATCCCGGCGCTCTCCAAGGCTGATGACAAGGGCAACATCAACGGCACGACGCTGCAGTTCGTGATCGACATCCGCTATCAGGGCGGGGCGTTCACCACCTCGTCTGGCGTTATCACCCTGACCGGAAAGTGCACCTCGCCCTATGACCGCGAGTTCTACTTCGCGCTGCCGAAGAACCCGGGCGGGGCATCTGCGCCGTGGGAAATCCGCGTCACCCGCCTGACCCCTGACAGCGACAGCGTCAAGCTCCAGAACGACATGTACTTCTCGTCGTTCGAGGGCACCATCGAAGCCAAGTTCAGCTACCCCTACACCGCTTACGTCGGCATGGTGGTCGATGGCGAGCAGTTCAACCAGCAAATCCCAGAGCGCAAGTACCTGATCGATGGCCGCATCATCAAGGTGCCGTCGAACTACACCACCCGCCTCTACGACGTGAACGGCAACATCAGCCGAAACCCGTCCTACTCGGGGGTCTGGGACGGCACCTTCAAGATGGAGTGGACGAACAACCCCGCGTGGGTGTTCTACGACATGGTGACCAACGACCGCTTCGGACTGGGGGACTACATCGACGTCAGCCAAGTCGATAAGTGGGGCCTCTACGAGATCGCCAAGTACTGCGACGAATACGTGCCGAACGGCATCGGTGGCGTTGAGCCCCGCATGACCTTCAACGGCGTCGTGGCCACCAAGCGCGAAGCCTACGACACCCTGTCGTCCATGGCCTCCTGCTTCCGTGGGATGGCTTACTGGTCCTCGGGCTCGATCGTCACCACACAGGACCGACCGAAGGACCCTGTCGTCCTCGCCTCGCAGTCGAACGTCGTTGACGGCCAGTTCGACCGCCAGAGCACGGCGCTGAAGAGCCGCCACACCGTCGCCATGGCGAAGTTCCTCAATCCGCAGGACTTCTACCGCGAAGACTACGCGATCTATCAGGACGAAGCCGGGATCGCCAAGTACGGCTATCGCGACACCAAGTTCGAGGCTGTCGGCTGCACCTCTCGCGGTCAGGCCTACCGCATGGCCAAGTGGACGGTGCTGACCGAACTCTATGAGAAGGGCACGACCACCTATCAGGCCGGTCTCGATCACGCTGGCGTCCGCCCGGGCGACATCATTGCCATTCAGGACCCGTCGCTGGCCAACGTCGAATTCGGCGGCCGTATTTCTGGGGGCAAACCGGAACTGATCACCAACGGCTTCTTCGGGGCCGGGATCACCGGCTGGACCTCTTCTGTATCCTCGGGTGGCGCGGTCACGTGGGGCGCGGGCAACGTCACCATCAAGGGCAACGGCACGACCCGCAGCTACATCGAGCAGGCGATCACCACGGAAGTCGGCAAGACCTACCGGATGCAGATCACCCCGTCTGGCGGCCAAGCCGTGACCGTCTGGGTGGGAACGACGCAGGGGGCCTCCGACCTGTCGAGCACTACGCCCTCGGCGTACAGTGAAATATCTTTCACTGCCACAGGCACGACGACATGGCTGCGTTTCAGTCGCCAGCCGACCACTACCGTCACCATAGATAACATCTCGGTACGGGAGCAGACCAACACGCCGTCCGTCATCAACGTCGATACGCCGGTCACTTTCGAGGGCGGCAATCTCTACTGGCTGAACGTCCAGATGCCGGATGGCTCGATCGAGGAAAGCAACATCGTCATCGCGGCCTACGACACGCCGACGACACAGATCACAGTCTCCCCGGCGTTTACCAAGACACCGGACGCGGAGAGCCAGTGGATCATATCGCGCAACGACCTCGTGCCCGAACTGATCCGCTGCATCACCATCAAGGAGAGCGAACCGAACAAGTACGACGTCATGGGCCTGCAGTACGAACCTTCGAAGTTCGCGGCTGTGGACGTGGACGCTCAGTTCTCGCTGATCAACACCTCGGACTTCCCGACCGGCGAGCTTGGCGTGCCCACGGCTCCGCTGTTCAACGAATACGCCTACGCCCTCGGCCAGACGGGCACGATCATGGCCCTCGACTGGTCGATCACCGCGCCGAAGGACCCGCGCATTGGCCAGTTCGAATGGCAGTACCAGACCCGCACGGAAACCGGGACCCTGAACGGCTGGCAGGCGGCAGGCTTCACCTATGACCCGATCATCACCATTCAGGACCTCGAAGCCGGTCTCTACAACTTCCGTGTCCGCTGCCTCGGCTCCTTCGGTGTCGGGGTCTCGGGCTGGACGGTGTCGAACGATATCCTGCTGCAGGGCTTGAACCTGCCCCCGGCCACGCCGACCCAGTTCCGCATCTCCGTCCTCGGGGATCAGAGCCAGTTCACGTGGCGGGTGGCCAACCAGTTGAACATCCGCTTCTACGAAATCCGCCACACGCCAAACGTCGTGGACCCGGAGTGGAACTCGGCTGTCGTCCTCGTCAAGGAAGTCGCAGCCTCGGGCATCCAGCTTCCGACCATGGCCGGTACCTTTCTGATCAAGTCGGTGTCGTTCACCGGGGTCTATTCGCTCGATGCGGCGATGATCCAGAACGGCGTCCTCGGGCAGGCGCTGAACGCGGTGGAAGTTCTGGACGAAGCAACCGCAGGCTTCCTCGGCACCAAGGGAAACACTCTCGTGGTATCCGGCGACCTGCAGCTAAAGCCCTACAACGGCAACTTCCCGCCGCTGGGGGTTTACGGCTTCAACGCCCCTGTTGACCTCGGGGACGAATACACCTCGCGCCTGTCGGCCACCATCGACATCTTCGGCCTAGACGTCCGCGACACGATCGACAAGTGGACGTCGCTCGATACGGTGACAGCGCTCTCGACGGCACGATCCGACCAGTGGAGCTTCGAACTCGAATACGCCACGACGCTGGACAACCCCGTCGCCGTGGTCGCTCGTGCCTCGACCGGCACCTACTTCGACGCCGATGGTATTCTGAAGACGGCGGCCAACAACGTTCCGCGCTACAACTACACGCCATCCGATCTGAGTGCCGTTGGCGTGCTGCTGGCGGAAGCGGCAGGGACCAACCTGATCCTGCAGTCGCAGACCTTCGACAACGCTTCGTGGACCAAGACCAACCTGACGGTCACGGCCAATGCTATCGCAGCCGTGGACGGCACGACGACGGCCGACAAACTGACGGAAGACACGACCGCTTCGGCCGTGCACCAGACCGCGCAGCAGTTCGCCGTCACCTCTGGCCAGAGCTACGTAGGGTCCACCTTCTTCAAGGCTGGGAGTGCTGGCCGCCTGTTGCGTGTGACGATGGGAGCGGCGTTTGCCTCCAACTGCTGGGCCTCCTTCGACCCCGTGACAGAACTTGTCACCCTCGGGGCTGACGCCGTAGCTGCAGGCTTCATCAAGTGCCTCGACGGCAACTACCGCGTCTGGGTGAAAGGGACGGCAACGTCTACCGGCAACGCCACCCTGTACATCTCGATGCAGACCTCGACCTCGCCAGTCTACACTGGCGACGGCACGTCCTTCATCTACGTCTGGGGCGCACAGGCCGAACAGGGCGCGGCAATGACGTCTTACATCCCGACGACGACGGCCACGGTGACCCGCGCAGCGGAAACCATCACCTCACAGCCGACGTGGACGGACTGGGAGCAGTTCATCACCCGCGACGTGAATTTCCGGGCGATCAAGTTCCGCGCCAAGCTGATCTCGAATGACCCTGCGGTTACGCCCGTGCTCCGGGGCCTCACGGTGAACGTTGACATGCCTGACCGCATCATCGCAGGAAATGACATCGCGGTTCCAACTGCAGGTCTGTCGATCGTCTTCGATCCTCCCTTCAAGGGCCTCACTGGTCTGTCGATGGCGAGCCAAGACATGGCGACCGGCGACCGCGCACTCATCACTGCGAAGTCTGAGAACGGCTTCACCATTCGCTACTTCAACAGCACAGGAACGGCTGTGGCTAGAACCTTCGACTACAACGCAGTTGGCTACGGAGTGAAGAAATGA

Genome Context

Tertiary structure

QIG66676.1
ColabFold structure
Source ColabFold
pLDDT 85.6
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank