Phage RBP Database

Genbank accession

XBS49665.1 [GenBank]

Protein name

chromosome condensation regulator

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,63

Protein sequence

MLPFVRMFDYGNEAPALPKIKKLSTGYQHTMLLTQNGDLYAKGSNAAGQLGTGNTTAAREWILVNSSVADVYCSANGTLIKKNDESWWSSGSGAAAGVNSVVNTWTNVSAQINSMLTSLPGSFIKQFVSSFYSSMAIRSDDTVWVIGQNNNGEITGTTAKYNTCVNITSSFPSTPVKIYGSENCMAYTDSTGAFYYSGQMVGGNAGGSANATTFTRYNVGLSTNKIIDFNTTGYGSFFIIETTAGVKQVYAGGYQRYGQLGDGGTTTTILAPAQITTPNSNLIKLFKGTSMYNQHLITKSGIYATGQNSQSQYNGTLGIGSNIDATTYTLAQISLSSYDDIEIHTTLDRTFLWAGDYVYSTGLNSTYSSITSNSYVLDMPSI

Physico‐chemical properties

protein length:	382 AA
molecular weight:	40870,90170 Da
isoelectric point:	5,90417
aromaticity:	0,11257
hydropathy:	-0,16806

Domain architecture

XBS49665.1

1 382 aa

STR 8–367 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR009091
STR

IPR009091

IPR009091
STR

IPR009091

IPR051553
Unmapped

IPR051553

PF13540
STR

PF13540

IPR000408
STR

IPR000408

XBS49665.1

1382 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0433
ATT

DC_0433 DC_1778

DC_0436
RBD

DC_0436

XBS49665.1

1382 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR009091	STR	IPR009091	8	367	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR009091	STR	IPR009091	15	333	Merged direct domain	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Central	Low	Positional only	141 proteins / 141 hits
IPR051553	Unmapped	-	19	197	InterPro	Ran GTPase-activating	-	-	-	-
PF13540	STR	DC_0403	20	49	InterPro cluster	Regulator of chromosome condensation (RCC1) repeat	Central	Low	Positional only	6 proteins / 8 hits
IPR000408	STR	DC_0062	23	33	InterPro cluster	Regulator of chromosome condensation, RCC1	Central	Low	Positional only	52 proteins / 98 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

XBS49665.1

1 382 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	68	68	0,2279
Central domain	69	286	219	0,3644
C-terminal	287	382	95	0,4678

Note: Constraints were applied during segmentation.
Fixed 49 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Escherichia phage fEgEco12 [NCBI] · taxon 3158837

Uroviricota Caudoviricetes

Host

Escherichia coli [NCBI] · taxon 562

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

XBS49665.1 [NCBI]

Genbank nucleotide accession

PP777464 [NCBI]

CDS location

range 333434 -> 334582
strand -

CDS

ATGTTACCTTTTGTTAGAATGTTTGATTATGGAAATGAAGCACCAGCATTACCAAAAATAAAGAAATTGTCAACTGGATACCAACATACTATGCTTTTAACGCAGAATGGCGATTTATATGCTAAGGGTAGTAATGCAGCAGGACAGCTAGGTACTGGTAATACAACAGCAGCGAGGGAATGGATATTAGTTAATAGTTCAGTTGCTGATGTTTATTGCTCTGCTAACGGTACATTGATTAAAAAGAATGATGAATCATGGTGGAGTTCTGGTTCCGGTGCAGCAGCAGGTGTCAATTCAGTTGTGAATACATGGACCAATGTGAGTGCACAAATCAATAGTATGCTTACTTCTCTCCCTGGTTCCTTTATTAAACAATTTGTATCCTCGTTTTATAGCTCAATGGCTATACGTTCAGATGACACAGTTTGGGTCATTGGTCAAAACAACAATGGTGAAATTACTGGAACTACTGCAAAATATAATACATGTGTGAATATAACCTCTAGTTTCCCCAGTACACCAGTGAAAATATATGGTAGTGAAAACTGTATGGCTTATACTGACAGTACTGGTGCATTTTATTATAGTGGTCAAATGGTCGGTGGGAATGCTGGTGGTTCAGCAAATGCAACAACATTTACTAGATATAATGTTGGTTTGAGTACAAATAAAATAATAGACTTTAATACTACTGGCTATGGTTCATTCTTTATTATAGAAACTACTGCTGGAGTTAAACAGGTATACGCTGGTGGTTACCAACGATATGGTCAATTGGGTGATGGTGGCACTACAACAACAATACTTGCTCCTGCACAAATAACAACACCCAACTCTAATTTAATTAAATTGTTTAAAGGTACGTCAATGTACAATCAGCATTTAATAACCAAATCTGGTATATATGCAACTGGTCAAAACTCCCAATCACAATACAATGGTACTTTGGGTATTGGTTCAAACATTGATGCTACTACATATACACTGGCACAAATATCATTATCATCATATGATGATATTGAAATACATACAACATTGGATAGAACATTCTTATGGGCAGGTGATTATGTTTATAGTACAGGTTTAAATTCTACATATTCATCAATCACTAGCAACTCATATGTGTTGGATATGCCATCAATATAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)