Protein

View in Explore
Genbank accession
YAS76701.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
TF
Evidence RBPdetect2
Probability 0,77
Protein sequence
MGSAHQQSDLVVSPNPVTLEGQYAIPVDLRLGETLYSFLHRHVENLDNEKWIVTIGGKEVPMQLWTLVKPKHGQHIEIRGDVGNRSILTLVAMLVLTYFTFGIGAYGGAIAGAYGTAAAAGVYIAGAMLINKMLAPKEPGSSSADRGQLFSLNGTNNQKRPGQPFGLAFGTPRIAPDVISDPYIWFEGDEQMLGMVLTPGFNVQSVEPIYNDDTLLSSYDGTKVFYNNFPGMPNDTIPLYTNQESVEGGSLDADEKHQTGPWVVRSTVDNTIRAVVNIQYTLFDTTSKGKPKQNQEFFQIQYAPTGTENWGQTFNFLVSNSDQKPHRRSYAFDLPEGKYDFRVRIAGANTDGQGANTSFTMANLVSIQPDKTNYDFIPRIGIQLKATGQFNGAPNELRTIVHTKPIPVWKGNAWVNEESSNPGAQILQYIRGIRDNTGRVVAGMEVPDEDIDIESFKAFMLHCAANNFTYDFWIQEARSHENIIQTIALNGLGQITASRGKFAAIWVMEDAPFNGIATMATMQEASFQVDYTLANAADGVDLSFVSRDDNWEIKTLRVIDPTSSRTEALNPSRVSAEGVTRAAHGAILARYYMGQSLYQTKDISFQTDAEHLSYGRYDKLQVSNDLTQWGFSGRLQSATRIANQVLLKLDVTVPALATPYIGIRALGEKTVRIFKVVDFQGENNQVIITPFPGQGEASNVWPSDMTFPGEDGTVVSDFLWIYDFKTTPGYPVRVSSIEPDMDQRASVSVVWEGPEFWDYVNRGIYQPPANASSLAAKPIASNLRFDEEVVVQGNTVFTNLTVSFDISGASLYTNVYMAGSDGILQQVGTRLTTRSCTFRIEEATELAILVTPYSLSEIPGRSASARYLPTSLGLAPRNVDTFDVNELDGGIREYTWGFNAETIQSPDFVGVEIRYTEGSVANPDWEVMTVIGDEGFHTAAFQAVAPVAGSYTFCIRARNSSGILSTDILQRFKTLSFNLGERYTELTQQLSRTELELTETIEQVDQYSEAVIQQAIEISEINGKTVNNRAFIAQVNATKIDSGQATAIITQQVGAQTGDLRATVQQNSEAITDIAGNISASYNVKVQADINGRYYLAGIGLGIYANGGVVQSEIAMLADRFVFLNQAVGGQYYYPFEIVNGVVYANAAMIRDGTITNAKIGEEIKSVNYQWDGANGIYIGWRIGKDGTAQFGGDVEIRGDVSARTITGSFESSVAISWTGSISNGGISPVFTLPAPINSTQSHRPELSLALQLKTGDGQDATSCTITMQRQNPNNANEWWNIVTREYAIFKFMNASMAFMYLDEWTNVPNNFRFVINQINGQAISLTNINGRIRGAR
Physico‐chemical
properties
protein length:1337 AA
molecular weight: 146857,72150 Da
isoelectric point:4,88221
aromaticity:0,10022
hydropathy:-0,21331

Domains

View on InterPro
Domain architecture
YAS76701.1
1 1337 aa
ATT 258–368 · RBD 1063–1202 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YAS76701.1
1 1337 aa
Domain Start End Length (AA) Confidence
N-terminal 1 630 630 0,7444
Central domain 631 1097 468 0,1074
C-terminal 1098 1337 239 0,5805
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Xanthomonas phage GJKY_A [NCBI] · taxon 3464432
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Xanthomonas citri [NCBI] · taxon 346
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales

Coding sequence (CDS)

Genbank protein accession
YAS76701.1 [NCBI]
Genbank nucleotide accession
PX310626.1 [NCBI]
CDS location
range 28843 -> 32856
strand +
CDS
ATGGGAAGCGCCCATCAACAATCAGACCTAGTAGTTAGCCCTAATCCGGTAACTCTGGAAGGTCAGTATGCTATTCCAGTTGATTTGCGTCTGGGCGAAACTCTGTATTCATTTCTACATCGCCATGTCGAAAATCTAGACAATGAGAAGTGGATTGTAACTATCGGTGGCAAAGAAGTCCCGATGCAATTGTGGACGCTTGTAAAGCCTAAGCATGGTCAGCACATTGAGATTCGCGGCGATGTAGGCAACCGCTCCATTCTCACCCTTGTGGCTATGCTGGTACTGACGTACTTCACCTTCGGTATCGGTGCCTATGGCGGCGCTATTGCGGGGGCGTATGGTACCGCTGCTGCGGCTGGTGTTTACATTGCTGGTGCAATGCTAATCAATAAGATGCTCGCCCCTAAGGAACCGGGAAGCAGTAGTGCGGATCGCGGGCAGCTATTTTCTCTTAATGGTACTAACAATCAGAAGCGACCGGGTCAACCTTTCGGTCTAGCTTTCGGTACTCCACGTATTGCACCTGACGTTATCTCAGACCCTTACATTTGGTTTGAAGGTGATGAACAGATGCTAGGTATGGTTCTAACTCCGGGCTTTAATGTCCAGAGCGTTGAGCCTATCTACAATGATGATACTTTGCTGTCGTCGTATGACGGCACTAAGGTTTTCTATAACAACTTCCCTGGGATGCCTAACGACACGATTCCTCTGTATACCAATCAGGAGTCGGTTGAAGGTGGTAGTTTGGATGCTGACGAAAAGCATCAAACTGGACCTTGGGTGGTTCGTAGCACCGTAGATAATACGATTCGCGCGGTCGTAAACATTCAATACACCCTGTTCGATACGACCAGCAAAGGTAAGCCTAAACAGAATCAAGAGTTTTTCCAGATTCAGTACGCGCCGACCGGCACTGAAAATTGGGGACAGACTTTTAACTTTTTGGTTAGCAACAGTGACCAAAAGCCACATCGTCGGTCTTATGCTTTTGATTTACCTGAAGGTAAGTACGATTTTCGTGTTCGAATTGCAGGCGCTAATACCGATGGCCAAGGTGCTAACACTTCGTTTACGATGGCTAATCTTGTATCGATTCAGCCTGACAAAACAAACTATGATTTCATTCCGCGTATTGGTATCCAGCTTAAGGCTACGGGCCAGTTTAACGGTGCGCCTAATGAACTTCGTACCATCGTCCATACTAAACCAATTCCAGTTTGGAAGGGTAATGCTTGGGTAAACGAAGAATCATCTAATCCCGGTGCACAAATTCTTCAATACATTCGAGGTATTAGAGATAATACCGGCCGTGTCGTGGCAGGTATGGAAGTGCCTGATGAAGATATTGACATTGAATCCTTTAAAGCTTTTATGTTGCATTGCGCAGCTAATAACTTTACTTACGACTTTTGGATTCAAGAAGCACGTTCTCACGAAAACATTATCCAGACTATTGCTCTAAATGGCCTTGGTCAGATTACCGCTTCGCGCGGTAAGTTTGCTGCTATCTGGGTGATGGAAGATGCGCCCTTCAATGGCATAGCCACAATGGCTACCATGCAAGAGGCTTCTTTTCAAGTTGACTATACCTTGGCTAATGCTGCCGATGGTGTAGATTTGAGCTTTGTTTCGCGTGACGACAATTGGGAGATTAAGACCCTTCGCGTAATCGACCCCACCAGCAGCCGCACAGAGGCTTTGAACCCGTCGAGGGTGTCTGCTGAGGGTGTGACGCGCGCGGCTCATGGGGCCATTCTGGCGCGCTACTACATGGGTCAATCGCTCTACCAGACCAAGGATATCAGCTTCCAGACCGACGCAGAGCATTTGAGCTATGGTCGGTATGACAAGTTGCAGGTTAGTAATGACCTAACACAATGGGGGTTTAGTGGTCGTTTGCAGAGTGCAACACGTATTGCTAATCAGGTATTGTTGAAGCTTGATGTTACCGTGCCTGCTTTGGCAACCCCATACATTGGCATTCGCGCACTCGGCGAAAAGACTGTTCGCATTTTCAAGGTTGTAGATTTCCAAGGTGAAAACAATCAGGTAATCATTACTCCTTTCCCCGGTCAGGGCGAGGCTAGTAATGTTTGGCCGTCTGATATGACCTTCCCTGGCGAGGATGGGACAGTTGTAAGTGACTTCCTATGGATCTATGATTTCAAGACTACTCCCGGTTATCCTGTTCGTGTTTCTTCTATCGAACCCGACATGGATCAACGCGCAAGTGTATCGGTTGTTTGGGAAGGTCCGGAATTCTGGGACTATGTTAATCGCGGTATTTACCAACCACCGGCTAACGCAAGTAGCCTTGCGGCTAAACCTATCGCTAGCAATCTTCGATTCGATGAAGAAGTTGTAGTGCAGGGCAATACGGTATTTACCAACCTGACAGTATCTTTTGATATTTCTGGAGCTTCGCTTTATACCAATGTCTACATGGCAGGTTCTGACGGTATCTTGCAGCAGGTCGGTACTCGCCTAACTACTCGCTCCTGCACTTTCCGAATTGAAGAAGCGACAGAGTTAGCTATTCTAGTTACACCTTACTCTCTGAGTGAAATTCCCGGTAGGTCCGCATCGGCTAGATACTTGCCAACCTCTTTGGGTCTTGCACCTCGCAATGTTGATACATTTGACGTTAACGAGTTGGACGGCGGTATTCGAGAATACACTTGGGGATTCAACGCTGAAACAATCCAATCGCCGGACTTTGTAGGCGTAGAAATCCGCTATACCGAAGGCAGTGTGGCTAATCCTGATTGGGAAGTTATGACGGTCATTGGCGATGAAGGTTTCCATACTGCGGCATTCCAAGCTGTTGCTCCGGTAGCTGGTAGTTACACGTTCTGCATTAGGGCGCGCAATAGTAGTGGCATTCTTTCTACGGATATATTGCAGCGCTTTAAAACTTTGAGCTTTAATCTTGGAGAACGCTATACCGAATTGACTCAGCAGCTTAGCCGTACAGAACTTGAGTTGACTGAAACTATTGAACAAGTAGATCAATACTCGGAAGCTGTTATTCAGCAGGCAATTGAGATTAGCGAGATTAACGGCAAGACTGTTAACAATCGCGCTTTTATCGCACAGGTTAACGCAACTAAGATTGATTCAGGTCAAGCGACCGCAATTATCACTCAGCAGGTAGGTGCACAAACTGGCGATCTTAGAGCGACAGTACAGCAGAATTCGGAAGCAATTACTGATATTGCAGGAAACATTAGTGCTAGTTACAATGTAAAGGTTCAAGCTGATATTAATGGGCGGTACTACCTTGCAGGTATCGGTCTTGGCATCTATGCGAACGGCGGCGTCGTTCAATCTGAAATCGCCATGCTGGCCGACAGGTTCGTATTCCTTAATCAGGCGGTAGGCGGGCAATACTATTATCCATTTGAAATTGTAAATGGCGTAGTCTATGCAAATGCTGCTATGATCCGCGACGGCACGATTACCAACGCTAAGATCGGCGAAGAGATTAAGTCGGTTAACTATCAATGGGATGGTGCTAACGGTATCTACATTGGTTGGCGTATCGGCAAAGATGGTACTGCGCAGTTTGGTGGTGACGTAGAAATCAGAGGTGATGTTTCGGCCCGCACTATTACAGGCTCGTTCGAATCTTCTGTAGCTATCAGTTGGACAGGATCTATTAGCAATGGCGGTATCAGTCCTGTATTTACCTTGCCTGCGCCTATTAATAGTACGCAATCACATCGACCGGAACTAAGTTTGGCTTTACAGCTTAAGACTGGCGATGGACAAGACGCGACAAGTTGCACAATCACTATGCAGCGTCAGAACCCTAATAATGCAAATGAGTGGTGGAATATTGTTACTCGTGAATATGCAATCTTTAAATTCATGAATGCGTCGATGGCGTTTATGTATTTGGATGAATGGACTAACGTGCCTAACAATTTCCGCTTTGTTATCAACCAAATTAACGGCCAAGCAATTAGCCTGACAAACATCAATGGCCGTATTCGCGGCGCGCGTTAA

Genome Context

Tertiary structure

YAS76701.1
ColabFold structure
Source ColabFold
pLDDT 79.8
Oligomeric state monomer
Download structure