Protein

View in Explore
Genbank accession
WVS24069.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MPNIMKPTGINAIWSENGQKVDPGAVKVGLGWVTELPPYQTANFIEYKQDLFNAHVNQHGIPEWDSVTEYQGNLSYTQGANGIIYKCLRTHSDKIPTDPLNITAGYWRVAFEDAGEAAKVQANLDRHVTNYNTLSGIGNVVIARQNLSVYSKAEGDARYAMKHGNGSNVFSVATATQPTHAIPLSQLSTLVPPATETVAGVMAVATTIETEAGANDTKAVSPLKAAQVYLKKKDNLSGLSNVTAARANLGLSDTATMPSSTFLKAGSNLADVPNKALARSNLGITSSATQPETYFLRSAQNLADVPNKAQARVNLGLTGMATTDPAAVMMKADNLAGLANTATARSNLGLGTASTRNTGDFLSSGANLSDLTNVQAARNNLGLKGAATLDVWGLPANTTAMDFQSSQSDISRGWARLPNGLLLQWGTGPGLSDDTRTNIQLPVPARILNVQVTVMGTFNNSIGPGAFMTDMWSNTGFRVSCNWGNWSYPFNWFAITSTL
Physico‐chemical
properties
protein length:499 AA
molecular weight: 52988,87710 Da
isoelectric point:7,73388
aromaticity:0,07214
hydropathy:-0,19780

Domains

Domains [InterPro]
G3DSA:2.60.40.3940
406–495
G3DSA:2.60.40.3940
IPR054075
416–495
IPR054075
WVS24069.1
1 499
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage LPS-5
[NCBI] 		3117427 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVS24069.1 [NCBI]
Genbank nucleotide accession
PP203294.1 [NCBI]
CDS location
range 21620 -> 23119
strand +
CDS
ATGCCAAACATTATGAAGCCTACGGGTATTAACGCTATCTGGTCTGAAAACGGCCAGAAGGTTGACCCGGGTGCTGTAAAAGTTGGGCTTGGATGGGTGACAGAACTACCTCCCTACCAAACTGCCAACTTCATTGAATACAAGCAAGACTTGTTCAACGCGCACGTTAACCAGCACGGTATTCCCGAATGGGATAGCGTCACAGAGTATCAGGGTAACCTGAGCTACACTCAAGGCGCTAACGGGATCATCTATAAGTGCCTTAGAACCCATTCCGACAAGATTCCAACTGACCCTCTGAACATTACAGCCGGATATTGGCGAGTGGCGTTTGAGGATGCGGGAGAGGCAGCTAAGGTTCAAGCCAACCTTGATCGGCATGTAACAAACTACAACACCCTCTCTGGGATTGGCAACGTAGTTATTGCAAGACAAAACCTAAGTGTGTATAGTAAAGCTGAAGGCGACGCCCGGTACGCTATGAAGCACGGGAACGGCTCTAATGTTTTCAGCGTCGCCACTGCCACACAGCCAACTCACGCGATCCCGCTGAGCCAGCTATCGACTCTCGTTCCTCCTGCTACCGAGACTGTAGCCGGGGTTATGGCAGTTGCTACGACTATCGAGACAGAAGCTGGAGCCAATGATACCAAGGCTGTGAGTCCGCTCAAGGCCGCACAGGTGTATCTGAAGAAGAAAGACAACCTTTCCGGTCTGTCTAACGTCACTGCCGCAAGAGCTAATCTAGGACTGTCGGATACAGCGACTATGCCTTCTTCTACATTCCTGAAGGCAGGTAGCAATCTGGCAGATGTGCCTAACAAGGCGCTGGCAAGATCGAATCTTGGAATTACAAGTAGTGCTACCCAGCCGGAAACCTATTTCTTGAGGAGCGCTCAGAACCTAGCAGATGTACCTAACAAGGCACAAGCTAGAGTCAACCTAGGCCTCACTGGGATGGCTACAACAGACCCTGCGGCGGTTATGATGAAGGCAGACAACCTTGCTGGATTGGCTAACACTGCTACCGCTCGGTCCAACCTAGGGCTAGGCACAGCTTCTACTAGAAATACAGGAGACTTCCTGTCGTCTGGGGCTAACCTGTCCGACCTCACGAACGTCCAAGCAGCTAGAAACAACCTAGGGTTGAAGGGAGCGGCTACGCTCGATGTATGGGGTCTTCCTGCGAATACAACTGCTATGGACTTCCAGTCCAGTCAGTCGGATATTTCCAGAGGATGGGCTCGACTACCAAACGGCCTTCTGCTACAATGGGGAACTGGTCCCGGTCTGTCTGATGACACAAGGACGAATATCCAACTCCCTGTTCCAGCACGAATCTTGAACGTTCAAGTGACCGTAATGGGGACGTTTAACAACTCCATCGGCCCGGGCGCTTTCATGACGGATATGTGGAGCAACACCGGGTTTAGAGTTAGCTGCAACTGGGGCAACTGGTCTTACCCGTTCAACTGGTTTGCTATCACTTCCACCCTGTAA

Tertiary structure

PDB ID
497c1fb0b729543686815d67b6395c7b42b55b40fa2f20b3a6786dea254fd754
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7500
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Personalized Inhaled Bacteriophage Therapy Decreases Multidrug-Resistant Pseudomonas aeruginosa Chan,B.K., Stanley,G.L., Kortright,K.E., Modak,M., Ott,I.M., Sun,Y., Wurstle,S., Grun,C., Kazmierczak,B., Rajagopalan,G., Harris,Z., Britto,C.J., Stewart,J., Talwalkar,J.S., Appell,C., Chaudary,N., Jagpal,S.K., Jain,R., Kanu,A., Quon,B.S., Reynolds,J.M., Mai,Q.A., Shabanova,V., Turner,P.E. and Koff,J.L. 2023-01-24 — GenBank