Protein

View in Explore
Genbank accession
YP_010659011.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TSP
Evidence RBPdetect2
Probability 0,46
Protein sequence
MTTKVIFTFHSPDGSPQANEKFTVRLTRPGMSDAEHCVVIPETYEMVTDAKGEFTMDLESSTSAYRVTAIGDEDEYEDDPCSQYTFTFYVPDSADPVYVQELILMPPPTNLPWDEEAMNKITQAVVDARNARDDAEESADRAEAQVGLAAEQVTLAKAEVTKATAQADRSKVEADRATTQATNAANSATAAANSATQANTQANRAKTEADRSKSEADRARDLADAVAEKVEGGSLPPLVGMNETFTYEGTNPYRWTVSGPATAVSDGDVMRLTKTDGSGSRAFLRQAVTFPDSHWIVYMRVKTQTGTAAQNRSAQIRFIAANNKDCVVYFNVNVNGIVEPNTIHMQGTEGSSRNAATMFTGLNTESWMDLAVKYDAVNRHIELFRRMPNGTWQKGGGRLMVDAIKPAFIEVSSMPVAPLNWWLDLDFISVCKPNLICYGDSIAAGQNEYGVTRGSNSYNNNRNWAGTWFGKVPLYATNRNNLVLVQGVEGRRTWQYLSQLSEISNSGVKVVFIHASTNDVNDATMTMEKRTSDTQAIIDQLHAVGAQVVLFNSMQGTKAYNDASTTTVKLRDYTDQWWNTELPKVNGLAQTLDIARLIAKDGYMDPALGASDGLHLTDASAQKIADKLGQFFSNSSDTNGFASLDSPAFTGIPTVPTQTPFLPYGKQIANTEYVITFIQDWTSNYGYGDLSMRNRTGSQMEAGGVRSGYYYVPGDSSNPLPGNVYAFVHHMSYDTNKGWELWNHCYTDRVYMRYSNNAGVWQTPVEVVTEKWMERNSFMTPRVSAFNRLPVASSAGFEGVVPLQTNSSGAWRNVNAGVAGLGLLGATTAGNALNYIGGMPKAPTNDRANSNLNNLPDECGFYGLGPAPYSNIPPGVDAINPVGSTVYHQVYDANTATQIFIPRTSDICYFRRKAGGTWSPWVRYLTDLQLVGTTTDSSAGVPNGAIMQINGSAAVNVGVALRFADGTQIVRALLQLDYGAVDLLQRRFTFPMAFVGKPVVTATLEQGTVADINNMPLQALGPVMVASIYAGNCNVRVMRSQGYTAGGFAAGSKMLCSVIAMGFWK
Physico‐chemical
properties
protein length:1065 AA
molecular weight: 115885,29450 Da
isoelectric point:5,23893
aromaticity:0,09296
hydropathy:-0,29709

Domains

View on InterPro
Domain architecture
YP_010659011.1
1 1065 aa
STR 429–637 · STR 848–924 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_010659011.1
1 1065 aa
Domain Start End Length (AA) Confidence
N-terminal 1 235 235 0,9856
Central domain 236 481 247 0,5571
C-terminal 482 1065 583 0,7903
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Pseudomonas phage vB_PaeP_TUMS_P121 [NCBI] · taxon 2873372
Uroviricota Caudoviricetes Schitoviridae Litunavirus Litunavirus P121
Host
Pseudomonas aeruginosa [NCBI] · taxon 287
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales

Coding sequence (CDS)

Genbank protein accession
YP_010659011.1 [NCBI]
Genbank nucleotide accession
NC_070863 [NCBI]
CDS location
range 39812 -> 43009
strand +
CDS
ATGACTACCAAGGTGATCTTCACCTTCCATAGCCCGGACGGTAGCCCACAGGCGAACGAGAAGTTCACTGTGCGGCTCACCCGTCCTGGTATGAGCGATGCAGAGCACTGCGTCGTAATTCCCGAAACCTACGAGATGGTGACCGACGCCAAGGGCGAGTTCACCATGGACCTGGAATCGTCCACCTCTGCCTACCGCGTCACTGCTATAGGTGATGAAGACGAGTACGAAGACGATCCCTGCTCGCAGTACACCTTCACCTTCTACGTGCCGGACTCTGCTGATCCGGTCTACGTGCAGGAACTGATCCTGATGCCTCCGCCCACGAATCTGCCGTGGGACGAGGAAGCCATGAACAAGATCACCCAGGCGGTGGTCGATGCTCGCAATGCACGAGACGATGCCGAAGAGTCGGCTGACCGTGCAGAGGCTCAGGTTGGTTTGGCTGCTGAGCAAGTGACCCTTGCAAAGGCAGAGGTGACCAAGGCTACCGCTCAGGCTGACCGCTCCAAGGTGGAAGCTGACCGTGCCACTACCCAGGCCACGAACGCAGCCAACTCGGCTACTGCTGCGGCGAACTCTGCCACCCAGGCCAACACTCAAGCCAACCGTGCGAAGACGGAAGCCGACCGCTCCAAGAGTGAGGCTGACCGTGCACGGGATCTGGCTGATGCCGTGGCTGAGAAAGTCGAGGGTGGATCTCTGCCTCCGCTGGTGGGCATGAACGAAACCTTCACCTACGAAGGCACCAACCCTTATCGGTGGACTGTCTCCGGCCCTGCTACGGCTGTATCGGATGGCGACGTCATGCGTCTGACCAAGACCGATGGCAGTGGCTCTCGTGCTTTCCTGCGACAGGCAGTGACCTTCCCGGACAGTCACTGGATCGTCTACATGCGTGTGAAGACCCAGACCGGTACCGCTGCTCAGAATCGATCTGCACAGATCCGCTTCATCGCTGCTAACAACAAGGACTGCGTGGTCTACTTCAACGTCAACGTGAACGGTATTGTCGAACCCAACACCATCCACATGCAGGGCACCGAGGGTAGTTCCCGTAACGCTGCCACCATGTTCACTGGTTTGAATACCGAGTCCTGGATGGATCTCGCTGTGAAGTACGATGCAGTCAACCGCCACATCGAACTTTTCCGCCGTATGCCCAATGGCACCTGGCAGAAGGGTGGCGGTCGTCTGATGGTTGATGCTATCAAGCCGGCCTTCATCGAAGTCTCGTCCATGCCGGTAGCACCTCTGAACTGGTGGCTGGATCTGGACTTCATCTCGGTGTGCAAGCCCAACCTCATCTGCTACGGCGACAGCATCGCCGCAGGCCAGAACGAGTACGGTGTGACTCGCGGGAGTAACTCCTACAACAACAATCGCAACTGGGCTGGTACTTGGTTTGGTAAGGTTCCGCTGTATGCCACGAATCGGAACAACCTCGTGCTTGTGCAGGGTGTGGAAGGTCGCCGTACTTGGCAGTACCTCAGCCAGCTGTCGGAGATCTCCAACTCTGGCGTCAAGGTAGTCTTCATTCATGCCAGCACGAATGACGTGAACGATGCCACCATGACCATGGAGAAGCGCACCTCTGATACCCAAGCCATCATCGACCAGCTTCATGCTGTCGGTGCCCAGGTGGTGCTGTTCAACTCCATGCAGGGCACGAAGGCGTACAACGATGCTTCGACCACTACCGTCAAGCTTCGGGACTACACTGATCAGTGGTGGAACACTGAACTACCCAAGGTCAATGGTTTGGCCCAGACGCTGGACATTGCTCGACTCATCGCCAAGGACGGGTACATGGACCCTGCCCTCGGTGCGAGTGATGGCCTGCACCTGACCGATGCCTCGGCACAGAAGATCGCCGACAAGCTTGGCCAGTTCTTCTCCAACTCCAGCGATACCAATGGCTTCGCCTCGTTGGATAGCCCAGCCTTCACTGGTATCCCGACTGTCCCCACGCAGACTCCTTTCCTGCCTTACGGCAAGCAGATCGCCAACACCGAGTACGTCATTACCTTCATCCAGGACTGGACCAGTAACTATGGTTACGGTGACCTGTCGATGCGCAATCGGACCGGTTCCCAAATGGAAGCCGGTGGGGTGCGTAGCGGTTATTACTATGTTCCTGGGGATTCTTCTAACCCCTTGCCGGGGAATGTTTATGCATTCGTGCACCACATGTCCTACGACACCAACAAGGGTTGGGAACTCTGGAACCACTGCTACACCGACCGTGTGTACATGCGTTATTCGAACAACGCAGGTGTATGGCAGACGCCGGTAGAGGTGGTTACTGAGAAGTGGATGGAGCGTAATAGCTTCATGACCCCACGGGTTTCTGCATTCAACCGTCTGCCCGTGGCTTCTTCTGCTGGTTTTGAAGGGGTTGTTCCCTTGCAGACCAACAGTAGTGGGGCTTGGCGTAACGTGAATGCTGGTGTAGCTGGGTTGGGCCTTCTCGGTGCAACTACGGCTGGTAATGCACTGAACTACATTGGTGGTATGCCCAAAGCCCCAACCAATGATCGGGCCAACAGTAACCTCAACAATTTGCCTGATGAGTGTGGTTTCTACGGTTTGGGACCAGCACCGTATTCCAATATCCCTCCGGGGGTTGATGCGATTAACCCAGTGGGTTCTACCGTCTACCATCAGGTTTACGACGCCAACACCGCTACGCAAATTTTCATTCCGCGTACTTCGGACATCTGCTATTTCCGCCGTAAGGCAGGGGGAACCTGGAGTCCATGGGTTCGTTACCTGACTGATTTGCAGCTGGTAGGCACCACTACTGACAGCAGTGCCGGTGTTCCGAATGGTGCCATCATGCAGATCAATGGGAGTGCTGCTGTAAACGTAGGTGTTGCCCTCCGCTTTGCAGACGGTACTCAAATTGTTCGGGCGTTACTCCAATTGGATTACGGTGCAGTAGATCTCCTTCAGCGTCGGTTCACTTTCCCCATGGCTTTTGTGGGTAAGCCGGTGGTAACCGCCACCCTGGAACAAGGTACTGTTGCTGACATCAACAACATGCCTTTGCAGGCTCTTGGCCCTGTTATGGTTGCCAGTATCTATGCAGGCAACTGCAACGTGCGTGTCATGCGGTCTCAGGGGTATACTGCTGGTGGATTCGCAGCAGGCTCTAAAATGCTGTGCTCTGTCATCGCAATGGGGTTCTGGAAATAA

Genome Context

Tertiary structure

YP_010659011.1
ESMFold structure
Source ESMFold
pLDDT 65.9
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Isolation, characterization and genome analysis of Pseudomonas phage vB_PaeP_TUMS_P121 Kamyab,H., Torkashvand,N., Shahverdi,A.R., Khoshayand,M.R., Sharifzadeh,M. and Sepehrizadeh,Z. 2023-04-25 — GenBank