Phage RBP Database

Genbank accession

WBU76255.1 [GenBank]

Protein name

hypothetical protein

RBP type

TSP

Evidence DepoScope

Probability 0,87

Protein sequence

MALFMGRKPSDNRPLLHVTSGSESISQLHGAPIASTLFHSDIPYLAISKVIEVTQFKHVEARQSGTRYYHYYEPVIPQEVWNYMNQGYLMCGSNVSYHPNYVEHRPIGVYSSDWSPTSADIFIGNFQGSMGGGHPYGGISSGWAPIDMHDMANADETVDQAVRIQSDSFITDYPTSKSYYRNNWSISGLAPKTKNYKRVIQSPNVSASASRATSASFTKENKINRALFANGTTSSRMRIIRPTASAPTTLTYSSTNPSDSNFKLIIYIFNVKYNSSNKLEHVKPDISDGIRISREDMVVGDLAMKNGMFITDPAPNEDLLDSTISSHKYKVKYPFFDRLVKGLTLAQLADYPFPYCRFFKSSNGNWSVNEGAGWYNIDTILLVHSPSALLGTGVSLDFSADEIKYKGSKGEYLIASRARKYTPFVLGGDSAITAVFPAETNTFAQLKQGTSFKKEVIDFGPSDWRRVLNPDQCGNYYKTVVKQRIKLPPGSTNKSYLSVHVSSPYLKGEASSTIAGKTSKMNVGIDGYSGWSNLQYMIFSKDHPDKEAVVSDIGFSTMRDVSKTSSDRSWWYFSSTGNKMQAVRIQYKIRVNWVRNELELVGWYKLTNAALQCAEYSGKTTYYNKLGERDVTYKTPEVRLGFYILGTA

Physico‐chemical properties

protein length:	648 AA
molecular weight:	72455,77990 Da
isoelectric point:	9,17090
aromaticity:	0,12037
hydropathy:	-0,41914

Domain architecture

WBU76255.1

1 648 aa

RBD 1–634 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR059609
RBD

IPR059609

WBU76255.1

1648 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR059609	RBD	DC_0630	1	634	InterPro cluster	Receptor-binding protein pb5	Central	Medium	Text match	299 proteins / 301 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

WBU76255.1

1 648 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	80	80	0,5033
Central domain	81	279	200	0,3817
C-terminal	280	648	368	0,9202

Note: Constraints were applied during segmentation.
Fixed 55 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Vibrio phage Wyman [NCBI] · taxon 3017802

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Vibrio harveyi [NCBI] · taxon 669

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

WBU76255.1 [NCBI]

Genbank nucleotide accession

OQ095915 [NCBI]

CDS location

range 8019 -> 9965
strand -

CDS

ATGGCACTTTTTATGGGCAGAAAGCCCTCAGATAATAGACCACTATTACATGTAACTAGTGGCAGTGAGTCTATTTCTCAATTACATGGGGCACCTATAGCCTCAACGCTATTTCACTCAGATATACCATACTTAGCAATATCAAAGGTTATAGAGGTAACTCAATTTAAGCACGTAGAAGCTAGACAATCGGGTACTAGATACTATCACTACTATGAACCGGTTATACCACAAGAGGTATGGAACTACATGAACCAAGGATATCTAATGTGTGGCTCAAACGTATCATACCACCCTAACTACGTAGAGCATAGACCTATAGGTGTATATTCTAGTGACTGGTCCCCTACTTCCGCAGATATATTTATAGGTAATTTTCAAGGTTCTATGGGAGGAGGACACCCTTACGGTGGTATTTCCAGTGGTTGGGCACCTATAGATATGCATGATATGGCTAATGCTGACGAAACGGTGGATCAGGCAGTACGTATCCAAAGTGATTCATTTATAACAGACTACCCTACTAGTAAAAGTTACTATAGAAATAACTGGAGCATATCTGGTTTAGCACCGAAAACTAAGAACTATAAAAGAGTAATTCAGTCTCCAAATGTGTCTGCATCAGCTAGTAGAGCTACATCAGCTAGTTTCACTAAGGAAAACAAAATAAATAGAGCACTGTTCGCTAATGGTACTACATCATCTAGGATGCGTATTATTAGACCTACAGCATCAGCTCCAACTACTCTAACTTACTCATCTACTAATCCATCAGATAGTAACTTCAAATTAATTATTTATATATTTAATGTAAAATATAATTCTAGCAACAAACTAGAGCATGTGAAGCCTGATATAAGTGATGGTATACGCATATCTCGTGAAGATATGGTAGTAGGAGATTTAGCTATGAAAAACGGAATGTTCATAACTGACCCTGCTCCAAATGAAGATTTACTAGATAGTACAATTTCTAGTCATAAATATAAAGTCAAGTATCCGTTTTTTGACAGGCTAGTAAAGGGTTTGACGTTGGCACAACTAGCAGACTACCCATTCCCTTACTGTAGATTTTTTAAGAGTAGCAATGGTAACTGGAGTGTTAATGAGGGTGCGGGCTGGTATAACATTGATACGATACTACTAGTGCACTCCCCGTCAGCGCTTCTTGGGACTGGCGTATCACTAGACTTCTCGGCGGATGAAATTAAATATAAAGGAAGTAAAGGTGAATATTTAATAGCATCAAGGGCTAGAAAGTATACACCTTTTGTACTTGGCGGTGATTCGGCTATTACGGCAGTATTTCCAGCTGAAACCAATACCTTCGCGCAATTAAAACAAGGTACTTCATTCAAGAAAGAGGTAATAGACTTCGGGCCATCGGATTGGAGACGTGTTCTGAACCCTGACCAATGTGGGAATTACTATAAAACAGTGGTGAAACAAAGAATAAAGCTACCACCAGGCAGTACTAATAAGAGCTATTTATCAGTGCATGTTAGCTCACCATACTTGAAGGGGGAGGCGAGCAGCACGATTGCTGGTAAAACGTCTAAAATGAATGTAGGTATTGATGGATATTCCGGCTGGTCAAACTTACAATACATGATATTTAGTAAGGATCATCCTGATAAGGAAGCGGTTGTATCTGATATAGGATTCAGCACAATGCGAGATGTATCAAAAACAAGCTCGGATAGGTCTTGGTGGTATTTCTCTAGTACTGGTAATAAGATGCAGGCTGTAAGAATACAATATAAGATACGGGTAAATTGGGTGCGCAATGAGCTAGAATTGGTAGGGTGGTATAAACTTACTAATGCTGCCCTACAGTGTGCTGAGTATTCTGGCAAGACAACATATTATAATAAACTTGGCGAGAGGGACGTAACGTACAAGACACCTGAGGTACGGTTAGGTTTCTATATATTGGGTACGGCATAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)