Protein

View in Explore
Genbank accession
CAB5229970.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,93
TF
Evidence Phold
Probability 1,00
Protein sequence
MTVNLSLLAGAGAQFFDNNGIPLSGGLVYTYTAGTTTPQASYTTSAGSIAHANPIVLDSSGRVPSGGEIWLTDAVAYKFVLKTAAAATIATYDNITGNASGIISSLAASSGSSLIGYTQGGVSAVATTVQAKLRQYVSAKDFGVVGNGSTDDTTAMQAFLNAAQGKTGLLNSGTYLINDTLIIKSGTILVGEGFSNSILVAGASLGNKAILLNQNYTGTLNVYTDVNISISNIGFNGSNITVTSSELVSLGKINGLSIDNCKFYNRPYIGLALGGCLNFNVTNSEFTGFGKATVTAEGGAALYIAAAGDTTVSKSGTITNNYIHNNEWSAIYANGTRLIISQNNLITNKEAGIFQTGNNNIINDNKIVAVTRKNISASGIESGGYAHIISNNYISDVDSSCIALTDVQGAVIEGNYLAQAARDDVYYPQGAGISIITTEASPNQPRDISIGNNKYSCGDLKTYSAVDMGNVGDAPFYITILTNDFSGVTYSSGQAIKVASGKSSVTQVFRDNIGAFDIFDYGGYAQARYYAGEALSPSASGTLTLSANTMYATPFAIRQQQVWTKIGIKVVTGQSGAYGYIGLYRMENGIPTTKIVDAGAADLISTGAKELTISEMLPQGMYAVFILPSTSGVVITAGTLSNDAIATVGTTTFGGAETLITGSYTYGTPPATFPTVVYATGSSPLITLRWGA
Physico‐chemical
properties
protein length:692 AA
molecular weight: 71570,15740 Da
isoelectric point:4,98901
aromaticity:0,08815
hydropathy:0,13107

Domains

Domains [InterPro]
IPR011050
131–458
IPR011050 IPR006626
IPR012334
137–510
IPR012334
IPR024535
137–353
IPR024535 IPR006626 IPR006626 IPR006626
IPR006626
237–260
IPR006626 IPR006626 IPR006626
CAB5229970.1
1 692
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB5229970.1 [NCBI]
Genbank nucleotide accession
LR798414 [NCBI]
CDS location
range 16789 -> 18867
strand -
CDS
ATGACCGTCAATCTTTCATTGTTGGCAGGGGCTGGCGCACAGTTTTTTGACAATAACGGCATCCCTTTATCTGGCGGTCTTGTATACACCTACACCGCCGGTACTACAACGCCACAAGCCTCATATACAACAAGCGCGGGAAGCATTGCCCACGCTAATCCCATTGTGTTGGATTCGTCGGGCCGTGTTCCTTCCGGTGGTGAAATTTGGTTAACCGATGCGGTTGCCTATAAATTTGTTTTAAAAACGGCGGCGGCGGCTACGATTGCTACCTATGACAACATAACCGGCAATGCAAGTGGCATTATTTCTTCTTTAGCCGCATCTTCCGGATCATCTTTAATTGGATACACACAAGGCGGCGTTAGTGCGGTAGCAACTACGGTACAAGCCAAATTGCGGCAATACGTAAGCGCAAAAGATTTTGGCGTTGTTGGCAATGGTTCGACAGATGATACAACAGCTATGCAAGCGTTTTTAAACGCAGCGCAAGGAAAAACTGGCCTTCTTAACTCGGGCACTTACCTTATTAACGATACGCTGATAATAAAGTCAGGAACTATTTTAGTTGGCGAAGGATTTTCAAATTCAATACTTGTTGCTGGCGCTAGCCTTGGAAACAAAGCCATACTCTTAAATCAAAACTATACGGGAACACTTAACGTATATACGGACGTAAATATTTCAATTTCTAATATTGGCTTTAATGGAAGCAATATTACTGTTACTAGTTCCGAATTGGTTTCGTTAGGAAAAATTAACGGTTTATCCATAGATAACTGCAAGTTTTATAACCGGCCTTATATTGGATTGGCATTGGGCGGTTGCCTTAATTTTAACGTTACAAATAGCGAATTTACCGGATTTGGTAAAGCCACCGTAACTGCCGAAGGTGGAGCAGCGCTTTATATTGCCGCCGCTGGCGATACGACTGTTTCAAAATCAGGAACAATAACTAATAACTATATCCACAATAATGAATGGTCTGCTATATATGCAAACGGAACTAGATTAATTATTAGCCAAAATAATTTAATAACAAATAAAGAAGCGGGTATATTCCAAACTGGCAACAACAATATTATTAACGACAATAAAATTGTTGCAGTTACTCGAAAAAATATTTCTGCTTCTGGAATTGAATCCGGAGGATATGCACATATTATATCAAACAACTATATTAGCGACGTTGATTCTAGTTGCATTGCTTTGACGGACGTGCAAGGGGCTGTTATTGAAGGCAACTATTTAGCGCAAGCTGCCAGAGATGATGTGTATTACCCTCAAGGTGCGGGGATAAGCATTATAACAACTGAAGCAAGCCCAAATCAACCAAGAGATATTTCAATCGGGAACAATAAATATAGTTGCGGCGATTTAAAAACTTATTCCGCAGTTGATATGGGCAATGTTGGCGATGCTCCTTTTTATATAACTATTCTAACAAATGATTTTTCTGGGGTTACATATTCTAGCGGGCAAGCTATTAAAGTTGCATCCGGAAAATCTAGCGTAACCCAAGTTTTTAGAGACAATATTGGTGCGTTTGATATTTTTGATTACGGCGGGTATGCCCAAGCAAGATACTACGCTGGTGAAGCATTGTCGCCATCCGCATCGGGAACATTGACGCTTTCGGCAAACACAATGTACGCAACGCCTTTTGCAATTAGGCAACAACAAGTTTGGACAAAAATTGGAATAAAAGTGGTTACCGGACAATCTGGTGCTTATGGATACATTGGTTTATATAGAATGGAAAACGGCATACCAACAACTAAAATTGTTGATGCTGGTGCGGCAGATTTAATCTCTACGGGCGCAAAAGAATTAACCATATCTGAAATGCTGCCACAAGGAATGTACGCCGTGTTTATTCTTCCAAGCACATCAGGCGTTGTCATTACCGCTGGCACATTAAGCAATGACGCAATAGCTACCGTGGGGACAACAACCTTTGGTGGGGCCGAAACTTTGATTACGGGGTCGTACACTTATGGAACGCCCCCAGCCACGTTTCCTACGGTAGTGTACGCAACCGGCTCTAGCCCTTTGATTACTTTGCGTTGGGGTGCTTAA

Tertiary structure

PDB ID
2a7d4a310d939da312bffa3f5caf1a90d6e413c4856a5aa74582b95ce5fcccc6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8203
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50