Phage RBP Database

Genbank accession

YP_008858914.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,84

TSP

Evidence RBPdetect2

Probability 0,38

Protein sequence

MATITDPTFRFATNVFDTDGTDKVYDISFELGYIDGEYVVAMSGVEDPDTKLLTDMQAHTVAFTDTPPGTRVKVSPVPVSGRKLIIFRQTDISKLLVKFQDGKLQTGRNLDLNSTQLIMAIQEILDGLRNNNLIVEQQIGTVVDMNKLINQIYQQVLQLLASGGIVSVTPRVWSGVWSEASETLGDTDFEIPGADVSGAGFYDTYIEGVGLQPGEDFSIILGDNPTIRFSRGDWPDGTRWFTVLRGYAKPYTGPAPVTTLAYPIIRSGASAYFIDQTSAFSVVLLSSPSAVTATVKLIPPAASNKVATGTFITLVQRGGVVSLSADPGVNLIIPAGTIARTRAANSALSLTCLDADANEWLVSGDLAKQE

Physico‐chemical properties

protein length:	370 AA
molecular weight:	39721,52050 Da
isoelectric point:	4,58233
aromaticity:	0,08108
hydropathy:	0,07054

Domain architecture

YP_008858914.1

1 370 aa

ATT 16–128 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR005604
ATT

IPR005604

YP_008858914.1

1370 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0914
STR

DC_0914

YP_008858914.1

1370 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR005604	ATT	DC_0240	16	128	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits

Proteins with similar domain architecture

Phage

Xylella phage Paz [NCBI] · taxon 1415145

Uroviricota Caudoviricetes Autographivirales Gujervirinae Pazvirus

Host

Xylella fastidiosa [NCBI] · taxon 2371

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales

Genbank protein accession

YP_008858914.1 [NCBI]

Genbank nucleotide accession

NC_022982.1 [NCBI]

CDS location

range 34368 -> 35480
strand +

CDS

ATGGCGACGATCACCGATCCAACCTTCCGTTTCGCCACCAACGTTTTCGACACGGATGGCACGGACAAGGTGTACGACATTAGCTTCGAGCTTGGCTACATCGACGGTGAATACGTCGTTGCTATGTCAGGAGTCGAAGACCCCGATACTAAGCTGCTGACCGACATGCAGGCGCACACTGTTGCGTTTACTGACACGCCTCCGGGCACTCGTGTTAAGGTCAGCCCTGTGCCGGTCTCTGGGCGCAAGCTCATCATCTTCCGTCAGACTGACATCAGCAAACTGCTGGTGAAGTTCCAAGACGGAAAGCTTCAGACCGGGCGAAACCTGGATCTGAACTCCACGCAGTTGATCATGGCGATCCAGGAAATCCTTGACGGGTTGCGCAACAACAACCTTATCGTGGAGCAGCAGATCGGCACGGTCGTTGATATGAACAAGCTGATCAACCAGATCTACCAGCAGGTTCTACAACTCCTGGCTTCTGGTGGTATCGTGTCTGTCACGCCGCGCGTGTGGAGTGGAGTGTGGTCCGAGGCGTCCGAGACTCTGGGCGACACGGACTTCGAGATTCCCGGCGCGGACGTGTCCGGTGCAGGGTTCTACGACACCTACATCGAGGGCGTGGGCTTGCAGCCTGGGGAGGACTTTTCCATCATCCTCGGCGACAACCCGACTATTCGGTTCTCGCGCGGAGACTGGCCCGACGGCACTCGGTGGTTCACCGTGCTTCGCGGGTATGCCAAGCCGTACACCGGCCCGGCTCCCGTCACGACCCTCGCGTACCCGATCATCCGAAGCGGTGCCTCGGCGTACTTCATTGACCAGACCTCTGCGTTCTCTGTGGTCTTGCTGTCCTCGCCGAGCGCGGTGACCGCAACGGTGAAGCTCATCCCTCCGGCCGCTTCCAACAAGGTGGCCACCGGCACGTTCATCACGCTGGTTCAGCGCGGCGGGGTCGTGTCCCTGTCTGCCGATCCTGGCGTCAACCTGATCATCCCTGCCGGTACCATCGCGCGCACTCGCGCAGCCAACAGCGCACTGTCTCTGACGTGCCTCGATGCTGACGCGAACGAGTGGTTGGTCTCCGGGGATCTTGCAAAGCAGGAGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)