Phage RBP Database

Genbank accession

YP_009802286.1 [GenBank]

Protein name

tail length tape measure protein

RBP type

TF

Evidence RBPdetect

Probability 0,76

Protein sequence

MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMAGITKSIDSIGAKLDDLSIAMIEVADKLEAGFDGVSRSVKAMGNDVAAATEKVQDRLYDTNRVLGGTARGFNDTAGAAGRASRAIGNTSGSARGATRNFAAMAKVGGGLPLLYAAIASNIFVLQSALEQLKLGDQLNRLEEFGVIVGTQTGTPVQSLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNINSLTTFQKQQAYANAVIAESTKRFGYLDEVLRATPWEQFAANADAALRTIQQAAAKYLGPVIDAINTVFYTSQASVSAEAARAQEKTNRQIDPTNVGAVALSLSASEEGYNKALDMYRESLDKRNKLKSEFDKRMEQADASTAAAIRLVGEGMPVGLAAGGFEVGGMRIGSSEANKKFVEETAAMGLQVARLDKEVEDSTENLNAWKSAYQAAGAAAAKANPEFQKQINLHRDTTDPGAVYDFNSTVLKGLTEQQKAYNQTKKTASDLANDIQNVAQSTDTAAKTSATLADAIKNIESLSQGTGKSADEYVKNLNLGYNTLSEMKTASQALSEYVKLTGNETKNQLAVQQKIADVYNQTKDKEKAQEAGRRLELQQLEEQEAALRRVLQTNQGNKAVEREIEKIQLEKIKLTNQGMEAQKKVKDYTDKILGIDREIALLNDRTMTSTQYRLEQLRLELQLEQEKTELYSKQADGQAKVEQSRRAQAQISRELWEAENQATASHVSALMDALEVSQTQRNVTGQSQILTERLSILQQQLELSKGNTEEEIRYRNEIYKTSAALEQLKKQREDQTYKSVVSSLGGTFTPTNGLSGADKEFADFENRMSMYDQAIAKMSEVDSASTALANSIGNFSLAVVANAQDSLDSITTISAGMQMVGQMMAYSANQQISAIDQAIAAEQKRDGKSEESKAKIKKLEAEKTKIQQREAKKQIIISTAVAMMNAAATQPFLPLGLTMMATAAAAGALSLAAASNASSMPSVDSGANTTSYLTLGERQKSIDVSMSANAGELSYVRGEKGIGNANSFVPRAEGGNMYPGVSYQMGEHGTEVITPMVPMKATPNDELKNSSNSASGRPIILNISAMDAASFREFASSNSGALRDAVELALNENGASLKTLGNS

Physico‐chemical properties

protein length:	1235 AA
molecular weight:	132880,57640 Da
isoelectric point:	5,45208
aromaticity:	0,04939
hydropathy:	-0,40534

Domain architecture

YP_009802286.1

1 1235 aa

TAS 1–81 · TAS 1198–1233 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR056207
TAS

IPR056207 Coil Coil Coil Coil Coil IPR056208

YP_009802286.1

11235 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0073
STR

DC_0073

YP_009802286.1

11235 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR056207	TAS	DC_0547	1	81	InterPro cluster	Tape measure protein PB2, N-terminal	N-terminal	High	Text match	97 proteins / 97 hits
Coil	Unmapped	-	524	544	Coils	Coil	-	-	-	-
Coil	Unmapped	-	695	749	Coils	Coil	-	-	-	-
Coil	Unmapped	-	779	806	Coils	Coil	-	-	-	-
Coil	Unmapped	-	813	833	Coils	Coil	-	-	-	-
Coil	Unmapped	-	1021	1041	Coils	Coil	-	-	-	-
IPR056208	TAS	DC_0881	1198	1233	InterPro cluster	Tape measure protein PB2, C-terminal	C-terminal	High	Text match	95 proteins / 95 hits

Proteins with similar domain architecture

Phage

Escherichia phage Gostya9 [NCBI] · taxon 2182345

Uroviricota Caudoviricetes Demerecviridae Tequintavirus Tequintavirus gostya9

Host No host information

Genbank protein accession

YP_009802286.1 [NCBI]

Genbank nucleotide accession

NC_047979 [NCBI]

CDS location

range 83248 -> 86955
strand -

CDS

ATGACTGATAAGCTAATACGAGAATTACTAATAGACGTTAAACAGAAGGGGGCAACCCGTACTGCAAAGTCTATCGAAAACGTATCTGATGCATTAGAAAATGCTGCTGCTGCTTCCGAACTGACAAATGAACAGTTAGGTAAAATGCCCAAAACTCTATACTCCATTGAGAGGGCGGCAGACAGAGCAGCGAAAAGTCTTACTAAAATGCAAGCTAGTAGGGGTATGGCTGGTATCACTAAATCTATTGATAGTATAGGTGCTAAGCTGGATGATCTATCTATTGCAATGATTGAAGTAGCAGACAAACTAGAGGCTGGATTTGATGGAGTATCTAGGTCTGTTAAAGCAATGGGTAATGATGTTGCAGCTGCAACAGAGAAAGTTCAAGATAGATTGTACGACACCAATAGAGTTTTAGGCGGTACAGCTAGAGGTTTTAATGATACTGCTGGTGCCGCTGGTAGAGCTTCTAGAGCTATTGGTAATACTTCTGGTTCAGCACGCGGAGCTACTCGTAACTTTGCGGCAATGGCTAAAGTTGGTGGTGGTTTACCTCTTCTGTACGCTGCTATTGCTTCTAACATCTTCGTTCTGCAATCTGCACTCGAACAACTTAAACTAGGTGACCAGCTAAATCGTCTAGAAGAATTTGGTGTTATAGTGGGTACTCAGACAGGTACTCCTGTTCAGTCTCTTGCTAGATCACTACAAGAAGCAGCCGGGTACGCTATTTCCTTTGAAGAAGCTATGAGACAAGCATCCTCTGCTTCTGCATACGGATTTGATGCCGAGCAACTTAATAAATTTGGTCTAGTAGCCCGTCGTGCTGCTGCTGTTCTTGGTGTTGATATGACTGATGCACTTAACCGTGTAATTAAGGGTGTATCAAAACAGGAAATCGAACTTCTGGATGAACTTGGTGTTACTATTCGTCTTAATGACGCATATGCTGACTATGTTAAACAGCTAAATGCTGCTAACACGGGTATAACTTATAATATTAATAGTCTCACTACTTTCCAGAAACAGCAAGCGTATGCTAATGCTGTTATAGCAGAGTCTACTAAACGTTTTGGTTACTTAGATGAAGTTTTACGTGCTACTCCGTGGGAGCAGTTTGCTGCTAACGCAGATGCTGCACTAAGAACAATACAACAAGCTGCTGCTAAGTACTTAGGACCAGTAATTGATGCTATCAACACAGTATTTTATACTTCTCAGGCTTCTGTATCTGCTGAAGCAGCTAGAGCTCAAGAAAAAACTAATAGACAGATAGATCCTACCAACGTTGGTGCTGTTGCTTTAAGTCTATCTGCCTCTGAAGAGGGGTATAATAAAGCTCTAGATATGTATAGGGAATCCCTGGATAAGCGTAATAAGCTAAAATCTGAGTTCGATAAACGAATGGAGCAAGCAGACGCTAGTACTGCCGCCGCTATTAGGTTGGTGGGCGAGGGAATGCCCGTTGGGTTAGCTGCTGGGGGATTTGAAGTAGGAGGGATGCGCATAGGTTCTTCCGAAGCTAATAAAAAGTTTGTAGAAGAAACAGCGGCTATGGGTCTACAAGTAGCCAGACTAGATAAGGAAGTAGAGGATTCTACTGAAAACCTTAATGCTTGGAAGTCAGCCTATCAAGCTGCGGGTGCGGCTGCTGCAAAAGCTAACCCAGAGTTCCAGAAACAGATTAATCTACATAGGGATACTACTGATCCTGGTGCTGTATATGACTTTAACTCTACAGTACTAAAAGGACTAACTGAACAACAGAAAGCATATAATCAAACTAAGAAAACTGCTAGTGACCTAGCTAATGATATACAGAACGTTGCTCAGAGTACAGATACCGCCGCTAAAACTAGTGCTACACTAGCAGATGCTATAAAAAATATAGAATCACTATCTCAAGGTACTGGTAAAAGTGCAGATGAGTACGTTAAAAACCTTAACCTGGGTTATAACACCCTGTCTGAAATGAAAACTGCATCCCAGGCTCTATCTGAGTACGTTAAACTAACTGGTAATGAAACTAAAAATCAGTTAGCAGTTCAACAGAAGATAGCTGATGTATATAATCAAACTAAGGATAAAGAAAAGGCACAGGAAGCTGGTAGGCGTTTAGAACTCCAACAGTTAGAAGAGCAAGAAGCTGCTTTACGCCGTGTTCTTCAAACAAACCAGGGGAACAAAGCTGTTGAGAGAGAAATTGAAAAAATTCAGCTGGAGAAAATTAAACTCACTAACCAGGGAATGGAAGCTCAGAAGAAGGTCAAGGATTACACAGATAAGATTCTTGGTATTGATAGAGAAATAGCTCTTCTTAATGACCGCACTATGACGAGTACTCAGTATCGTTTGGAGCAGTTAAGACTAGAGCTGCAGTTAGAGCAGGAAAAAACGGAATTATACTCTAAACAAGCGGATGGTCAAGCTAAGGTAGAACAGTCAAGGCGCGCTCAGGCACAAATAAGTAGAGAGCTATGGGAAGCAGAAAATCAGGCAACTGCCTCACATGTATCAGCCCTCATGGATGCATTAGAGGTTAGCCAAACACAGAGAAATGTTACTGGCCAATCCCAAATTCTTACGGAAAGACTATCCATTCTGCAGCAACAGCTGGAACTATCTAAGGGCAATACCGAGGAAGAGATCAGGTATCGTAATGAGATTTATAAAACTTCAGCGGCCCTAGAACAGCTTAAAAAGCAAAGAGAGGATCAAACGTACAAATCAGTCGTATCCTCACTAGGGGGTACATTCACTCCTACCAATGGATTATCTGGTGCTGATAAAGAGTTTGCTGATTTTGAGAATAGAATGTCTATGTATGATCAGGCTATAGCTAAGATGTCAGAAGTGGATTCTGCTTCTACAGCATTGGCTAACAGCATAGGTAATTTCTCCTTAGCAGTGGTGGCTAATGCACAAGATAGCTTGGATAGCATAACAACCATATCTGCAGGTATGCAGATGGTGGGACAGATGATGGCATATTCTGCTAACCAGCAAATAAGTGCAATAGACCAGGCTATTGCAGCAGAACAGAAGCGTGATGGTAAATCTGAGGAATCTAAAGCTAAAATCAAGAAGTTGGAGGCAGAAAAGACTAAGATACAGCAGCGAGAAGCTAAAAAGCAAATAATCATATCTACAGCCGTAGCTATGATGAACGCTGCAGCTACCCAACCGTTCTTACCATTAGGGTTAACGATGATGGCCACTGCGGCTGCTGCAGGCGCACTATCCTTAGCCGCTGCTTCTAATGCATCCTCTATGCCCTCTGTGGATTCTGGAGCAAATACCACTAGTTATTTAACTCTTGGAGAGCGTCAGAAGAGCATTGATGTATCTATGTCTGCTAATGCTGGAGAACTATCTTATGTACGGGGTGAGAAAGGTATTGGTAATGCCAACTCATTTGTGCCGCGTGCCGAAGGTGGTAATATGTACCCAGGGGTTAGCTACCAGATGGGAGAACACGGTACAGAAGTAATTACTCCTATGGTTCCTATGAAAGCTACACCTAATGATGAGTTAAAAAATTCCTCTAATTCAGCTTCAGGAAGACCTATCATCCTGAATATTAGTGCTATGGATGCTGCTAGTTTTAGAGAGTTCGCCTCTAGTAATAGCGGTGCTCTGAGGGATGCAGTAGAATTAGCTCTGAATGAGAATGGTGCTAGCCTAAAAACACTAGGAAATTCTTAA

Title	Authors	Date	PMID	Source
Looking for novel host receptors of T5-like bacteriophages	Kulikov,E.E., Letarov,A.V. and Golomidova,A.K.	2019-11	—	GenBank

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Literature